contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA577226" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23514003 | 23514003 | PRJNA577226_S_NODE_29639_length_229_cov_4.677083_g28700_i0 | PRJNA577226 | 29639 | 229 | 4.677083 | 10.71052007 | Syntrophobacteraceae bacterium | 2052185 | Bacteria | Bacteria | 73.6 | 1.33e-13 | NR | HQN20565.1 | 2052185 | g28700 | i0 | 55.7 | 1.59825327510917 | 61 | 27 | 79.9 | 0 | 2 | 184 | 22 | 82 | HQN20565.1 DUF6166 domain-containing protein [Syntrophobacteraceae bacterium] | diamond | 366 | 73.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacteraceae bacterium | |||
| 29953275 | 29953275 | PRJNA577226_S_NODE_66171_length_155_cov_1.957627_g65232_i0 | PRJNA577226 | 66171 | 155 | 1.957627 | 3.03432185 | Geomonas oryzae | 2364273 | Bacteria | Bacteria | 42 | 0.021 | NR | WP_129126136.1 | 2364273 | g65232 | i0 | 44 | 2.61290322580645 | 50 | 26 | 92.9 | 1 | 145 | 2 | 129 | 178 | WP_129126136.1 glycosyltransferase family 2 protein [Geomonas oryzae] | diamond | 405 | 42 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geomonas | Geomonas oryzae | ||
| 31167068 | 31167068 | PRJNA577226_S_NODE_31335_length_223_cov_1.849462_g30396_i0 | PRJNA577226 | 31335 | 223 | 1.849462 | 4.12430026 | Bacteria | 2 | Bacteria | Bacteria | 80.1 | 8.58e-17 | NR | WP_298437389.1 | 46610 | g30396 | i0 | 62.9 | 3.18834080717489 | 62 | 23 | 83.4 | 0 | 34 | 219 | 1 | 62 | WP_298437389.1 hypothetical protein [Geobacter sp.] | diamond | 711 | 80.9 | 0.990111248454882 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. | ||
| 31768221 | 31768221 | PRJNA577226_S_NODE_17197_length_309_cov_1.643382_g16258_i0 | PRJNA577226 | 17197 | 309 | 1.643382 | 5.07805038 | Oceanidesulfovibrio | 2905722 | Bacteria | Bacteria | 48.1 | 0.00102 | NR | WP_144302954.1 | 54767 | g16258 | i0 | 35.1 | 1.8252427184466 | 94 | 54 | 86.4 | 3 | 295 | 29 | 279 | 370 | WP_144302954.1 replication restart helicase PriA [Oceanidesulfovibrio indonesiensis] | diamond | 564 | 48.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Oceanidesulfovibrio | Oceanidesulfovibrio indonesiensis | ||
| 31849565 | 31849565 | PRJNA577226_S_NODE_12677_length_364_cov_3.091743_g11738_i0 | PRJNA577226 | 12677 | 364 | 3.091743 | 11.25394452 | Pseudodesulfovibrio cashew | 2678688 | Bacteria | Bacteria | 43.5 | 0.0289 | NR | WP_158947438.1 | 2678688 | g11738 | i0 | 29.9 | 0.881868131868132 | 107 | 67 | 83.2 | 3 | 15 | 317 | 28 | 132 | WP_158947438.1 MarR family winged helix-turn-helix transcriptional regulator [Pseudodesulfovibrio cashew] | diamond | 321 | 43.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Pseudodesulfovibrio | Pseudodesulfovibrio cashew |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;