RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA577226" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20263776 20263776 PRJNA577226_S_NODE_32576_length_218_cov_2.994475_g31637_i0 PRJNA577226 32576 218 2.994475 6.5279555 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 77.8 1.2e-14   NR MBR3143877.1 2026720 g31637 i0 48.6 1.95412844036697 72 37 99.1 0 218 3 678 749 MBR3143877.1 DEAD/DEAH box helicase family protein [Candidatus Saccharibacteria bacterium] diamond 426 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27932462 27932462 PRJNA577226_S_NODE_45925_length_184_cov_1.312925_g44986_i0 PRJNA577226 45925 184 1.312925 2.415782 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 56.2 8.97e-8   NR MCA9301483.1 2026720 g44986 i0 54.8 2.05434782608696 42 18 68.5 1 4 129 129 169 MCA9301483.1 CHAP domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 378 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29069286 29069286 PRJNA577226_S_NODE_40908_length_194_cov_2.235669_g39969_i0 PRJNA577226 40908 194 2.235669 4.33719786 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 64.7 3.45e-10   NR HET6925064.1 2973664 g39969 i0 42.9 2.18041237113402 70 34 99 1 194 3 147 216 HET6925064.1 phage portal protein [Candidatus Saccharimonadales bacterium] diamond 423 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30237624 30237624 PRJNA577226_S_NODE_8852_length_448_cov_2.384428_g7917_i0 PRJNA577226 8852 448 2.384428 10.68223744 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 78.2 6.85e-15   NR MCA9325962.1 2026720 g7917 i0 43.6 0.676339285714286 101 54 67 2 321 22 59 157 MCA9325962.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 303 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30332839 30332839 PRJNA577226_S_NODE_28772_length_233_cov_2.000000_g27833_i0 PRJNA577226 28772 233 2 4.66 Candidatus Nanosynbacter sp. BB 2725945 Bacteria Bacteria 109 7.88e-27   NR WP_338520426.1 3393757 g27833 i0 70.1 1.98283261802575 77 21 97.9 2 232 5 52 127 WP_338520426.1 GH25 family lysozyme [Candidatus Nanosynbacter sp. BB002] diamond 462 109 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002
32084650 32084650 PRJNA577226_S_NODE_16018_length_321_cov_1.785211_g15079_i0 PRJNA577226 16018 321 1.785211 5.73052731 Bacillati 1783272 Bacteria Bacteria 83.2 5.61e-16   NR HET6925064.1 2973664 g15079 i0 43.8 1.74766355140187 105 57 96.3 2 2 310 415 519 HET6925064.1 phage portal protein [Candidatus Saccharimonadales bacterium] diamond 561 83.6 0.995215311004785 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;