RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA577226" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA577226 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27504123 27504123 PRJNA577226_S_NODE_23143_length_262_cov_1.386667_g22204_i0 PRJNA577226 23143 262 1.386667 3.63306754 root 1 Root_unresolved Root_unresolved 70.1 1.06e-11   NR YP_009620046.1 2047788 g22204 i0 48.1 1.88931297709924 81 42 92.7 0 3 245 236 316 YP_009620046.1 DNA polymerase [Gluconobacter phage GC1] diamond 495 70.1 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae Gammatectivirus Gammatectivirus GC1
32134546 32134546 PRJNA577226_S_NODE_70878_length_151_cov_1.350877_g69939_i0 PRJNA577226 70878 151 1.350877 2.03982427 Enterobacteria phage PRDaquamarine 3127581 Viruses Viruses 45.8 6.66e-4   NR WWT37740.1 3127581 g69939 i0 49 0.973509933774834 49 25 97.4 0 150 4 112 160 WWT37740.1 assembly protein [Enterobacteria phage PRDaquamarine] diamond 147 45.8 1 Viruses   Bamfordvirae Preplasmiviricota Tectiliviricetes Kalamavirales Tectiviridae   Enterobacteria phage PRDaquamarine

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;