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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA576995" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA576995 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4388366 4388366 PRJNA576995_P_NODE_41044_length_244_cov_0.900585_g40452_i0 PRJNA576995 41044 244 0.900585 2.1974274 Clostridia bacterium 2044939 Bacteria Bacteria 103 7.15e-24   NR GHU54076.1 2044939 g40452 i0 60.9 0.848360655737705 69 27 84.8 0 20 226 266 334 GHU54076.1 RNA-splicing ligase RtcB [Clostridia bacterium] diamond 207 103 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
26604512 26604512 PRJNA576995_P_NODE_33001_length_261_cov_1.414894_g32409_i0 PRJNA576995 33001 261 1.414894 3.69287334 Cohnella faecalis 2315694 Bacteria Bacteria 43.1 0.0323   NR WP_119148286.1 2315694 g32409 i0 31 0.96551724137931 84 51 88.5 1 9 239 94 177 WP_119148286.1 class I SAM-dependent methyltransferase [Cohnella faecalis] diamond 252 43.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Cohnella Cohnella faecalis
26858458 26858458 PRJNA576995_P_NODE_42241_length_242_cov_0.911243_g41649_i0 PRJNA576995 42241 242 0.911243 2.20520806 Fictibacillus arsenicus 255247 Bacteria Bacteria 102 1.2399999999999999e-23   NR WP_066287976.1 255247 g41649 i0 56.3 1.98347107438017 80 35 99.2 0 242 3 89 168 WP_066287976.1 citrate synthase/methylcitrate synthase [Fictibacillus arsenicus] diamond 480 102 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Fictibacillaceae Fictibacillus Fictibacillus arsenicus
26921393 26921393 PRJNA576995_P_NODE_41842_length_243_cov_0.905882_g41250_i0 PRJNA576995 41842 243 0.905882 2.20129326 Ligaoa zhengdingensis 2763658 Bacteria Bacteria 45.1 0.0058   NR WP_343274643.1 2763658 g41250 i0 45 1.48148148148148 40 22 49.4 0 122 241 1294 1333 WP_343274643.1 family 16 glycoside hydrolase, partial [Ligaoa zhengdingensis] diamond 360 45.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ligaoa Ligaoa zhengdingensis
26952877 26952877 PRJNA576995_P_NODE_37862_length_248_cov_0.880000_g37270_i0 PRJNA576995 37862 248 0.88 2.1824 Clostridiales bacterium 1898207 Bacteria Bacteria 42.7 0.0383   NR HBB28923.1 1898207 g37270 i0 79.2 0.290322580645161 24 5 29 0 74 3 12 35 HBB28923.1 ornithine--oxo-acid transaminase [Clostridiales bacterium] diamond 72 42.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
26966533 26966533 PRJNA576995_P_NODE_8582_length_536_cov_1.330454_g7994_i0 PRJNA576995 8582 536 1.330454 7.13123344 FCB group 1783270 Bacteria Bacteria 185 1.0599999999999999e-53   NR MDE5853453.1 41978 g7994 i0 51.1 38.8544776119403 178 85 99.6 1 534 1 96 271 MDE5853453.1 glutamine synthetase III [Ruminococcus sp.] diamond 20826 186 0.99462365591397806 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae Ruminococcus Ruminococcus sp.
27205760 27205760 PRJNA576995_P_NODE_40102_length_245_cov_0.895349_g39510_i0 PRJNA576995 40102 245 0.895349 2.19360505 Pseudogracilibacillus sp. 1968904 Bacteria Bacteria 122 2.17e-30   NR HLR22482.1 1968904 g39510 i0 72.8 1.98367346938776 81 22 99.2 0 3 245 17 97 HLR22482.1 heavy metal translocating P-type ATPase [Pseudogracilibacillus sp.] diamond 486 122 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Pseudogracilibacillus Pseudogracilibacillus sp.
27521834 27521834 PRJNA576995_P_NODE_12543_length_428_cov_1.194366_g11951_i0 PRJNA576995 12543 428 1.194366 5.11188648 Hungatella sp. 2613924 Bacteria Bacteria 44.7 0.0499   NR MCI9359561.1 2613924 g11951 i0 31.6 0.820093457943925 117 60 68.7 5 77 370 249 364 MCI9359561.1 serine hydrolase [Hungatella sp.] diamond 351 44.7 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Hungatella sp.
28406083 28406083 PRJNA576995_P_NODE_38186_length_247_cov_1.637931_g37594_i0 PRJNA576995 38186 247 1.637931 4.04568957 Bacillales bacterium 1904864 Bacteria Bacteria 47 0.00118   NR HET7580189.1 1904864 g37594 i0 48.7 0.473684210526316 39 20 47.4 0 245 129 373 411 HET7580189.1 NO-inducible flavohemoprotein [Bacillales bacterium] diamond 117 47 1 Bacteria   Bacillati Bacillota Bacilli Bacillales     Bacillales bacterium
28437719 28437719 PRJNA576995_P_NODE_36306_length_250_cov_0.870056_g35714_i0 PRJNA576995 36306 250 0.870056 2.17514 Catenibacterium mitsuokai 100886 Bacteria Bacteria 48.5 1.09e-4   NR CUO74938.1 100886 g35714 i0 46.3 0.648 54 27 64.8 1 6 167 30 81 CUO74938.1 Uncharacterised protein [Catenibacterium mitsuokai] diamond 162 48.5 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Coprobacillaceae Catenibacterium Catenibacterium mitsuokai
28672290 28672290 PRJNA576995_P_NODE_33007_length_261_cov_1.356383_g32415_i0 PRJNA576995 33007 261 1.356383 3.54015963 root 1 Root_unresolved Root_unresolved 74.3 2.68e-15   NR MBK8156976.1 1306 g32415 i0 73.9 3.70114942528736 46 12 52.9 0 35 172 18 63 MBK8156976.1 hypothetical protein [Streptococcus sp.] diamond 966 74.7 0.994645247657296 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sp.
28974501 28974501 PRJNA576995_P_NODE_34228_length_253_cov_1.683333_g33636_i0 PRJNA576995 34228 253 1.683333 4.25883249 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 144 2.85e-40   NR MBO5121700.1 2485925 g33636 i0 86.9 0.99604743083004 84 11 99.6 0 252 1 108 191 MBO5121700.1 ABC transporter permease [Oscillospiraceae bacterium] diamond 252 144 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29416250 29416250 PRJNA576995_P_NODE_33609_length_257_cov_1.663043_g33017_i0 PRJNA576995 33609 257 1.663043 4.27402051 Oceanobacillus indicireducens 1004261 Bacteria Bacteria 150 5.1099999999999996e-42   NR WP_188855863.1 1004261 g33017 i0 96.2 0.910505836575875 78 3 91.1 0 22 255 1 78 WP_188855863.1 NAD(P)/FAD-dependent oxidoreductase [Oceanobacillus indicireducens] diamond 234 150 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Oceanobacillus Oceanobacillus indicireducens
29682196 29682196 PRJNA576995_P_NODE_35550_length_250_cov_0.870056_g34958_i0 PRJNA576995 35550 250 0.870056 2.17514 Bacillati 1783272 Bacteria Bacteria 50.8 5.59e-5   NR MBR6406332.1 1898203 g34958 i0 50 2.484 52 26 62.4 0 168 13 1 52 MBR6406332.1 diaminopimelate decarboxylase [Lachnospiraceae bacterium] diamond 621 50.8 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
29682201 29682201 PRJNA576995_P_NODE_40550_length_245_cov_0.872093_g39958_i0 PRJNA576995 40550 245 0.872093 2.13662785 Bacteria 2 Bacteria Bacteria 114 2.57e-28   NR WP_113920115.1 645887 g39958 i0 65.4 11.9020408163265 81 28 99.2 0 2 244 97 177 WP_113920115.1 asparaginase [Alkalibaculum bacchi] diamond 2916 115 0.991304347826087 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Alkalibaculum Alkalibaculum bacchi
29795111 29795111 PRJNA576995_P_NODE_35991_length_250_cov_0.870056_g35399_i0 PRJNA576995 35991 250 0.870056 2.17514 Paraclostridium bifermentans 1490 Bacteria Bacteria 41.6 0.0245   NR MDO7206374.1 1490 g35399 i0 65.2 0.276 23 8 27.6 0 9 77 26 48 MDO7206374.1 hypothetical protein [Paraclostridium bifermentans] diamond 69 41.6 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Paraclostridium Paraclostridium bifermentans
30061347 30061347 PRJNA576995_P_NODE_36691_length_249_cov_0.875000_g36099_i0 PRJNA576995 36691 249 0.875 2.17875 PVC group 1783257 Bacteria Bacteria 144 7.54e-40   NR MFI3175412.1 1879010 g36099 i0 85.4 31.6144578313253 82 12 98.8 0 248 3 146 227 MFI3175412.1 type I glyceraldehyde-3-phosphate dehydrogenase [Bacillota bacterium] diamond 7872 145 0.993103448275862 Bacteria   Bacillati Bacillota         Bacillota bacterium
30142424 30142424 PRJNA576995_P_NODE_36332_length_249_cov_2.562500_g35740_i0 PRJNA576995 36332 249 2.5625 6.380625 Saccharibacillus sp. O16 1978120 Bacteria Bacteria 78.6 9.86e-15   NR OWA35662.1 1978120 g35740 i0 47.6 3.95180722891566 82 42 97.6 1 4 246 184 265 OWA35662.1 hypothetical protein B9G55_11945 [Saccharibacillus sp. O16] diamond 984 78.6 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Saccharibacillus Saccharibacillus sp. O16
30156049 30156049 PRJNA576995_P_NODE_41652_length_243_cov_0.905882_g41060_i0 PRJNA576995 41652 243 0.905882 2.20129326 root 1 Root_unresolved Root_unresolved 52.4 1.72e-6   NR WP_006783152.1 154046 g41060 i0 50 1.53086419753086 48 23 59.3 1 84 227 3 49 WP_006783152.1 thioredoxin [Hungatella hathewayi] diamond 372 52.4 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Hungatella hathewayi
30332805 30332805 PRJNA576995_P_NODE_26072_length_299_cov_1.362832_g25480_i0 PRJNA576995 26072 299 1.362832 4.07486768 Streptococcus pneumoniae 1313 Bacteria Bacteria 57 2.39e-8   NR WP_155459117.1 1313 g25480 i0 47.5 0.802675585284281 80 33 80.3 2 36 275 1 71 WP_155459117.1 hypothetical protein, partial [Streptococcus pneumoniae] diamond 240 57 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pneumoniae
30364380 30364380 PRJNA576995_P_NODE_41832_length_243_cov_0.905882_g41240_i0 PRJNA576995 41832 243 0.905882 2.20129326 Clostridium manihotivorum 2320868 Bacteria Bacteria 42.4 0.0464   NR WP_128213188.1 2320868 g41240 i0 44.4 0.555555555555556 45 23 54.3 2 176 45 133 176 WP_128213188.1 CPBP family intramembrane glutamic endopeptidase [Clostridium manihotivorum] diamond 135 42.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium manihotivorum
30566758 30566758 PRJNA576995_P_NODE_41053_length_244_cov_0.900585_g40461_i0 PRJNA576995 41053 244 0.900585 2.1974274 FCB group 1783270 Bacteria Bacteria 44.3 0.00564   NR WP_118519056.1 1730 g40461 i0 44 2.27459016393443 50 27 61.5 1 8 157 76 124 WP_118519056.1 MULTISPECIES: leucine-rich repeat domain-containing protein [Eubacterium] diamond 555 44.7 0.991051454138702 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium  
30819862 30819862 PRJNA576995_P_NODE_38614_length_247_cov_0.885057_g38022_i0 PRJNA576995 38614 247 0.885057 2.18609079 Clostridia 186801 Bacteria Bacteria 43.1 0.0299   NR MFR7766399.1 1898203 g38022 i0 36.9 1.57894736842105 65 34 70.4 1 177 4 1615 1679 MFR7766399.1 leucine-rich repeat protein [Lachnospiraceae bacterium] diamond 390 43.1 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
31104048 31104048 PRJNA576995_P_NODE_33935_length_255_cov_1.467033_g33343_i0 PRJNA576995 33935 255 1.467033 3.74093415 Megasphaera 906 Bacteria Bacteria 42.7 0.0457   NR WP_300623657.1 165188 g33343 i0 35.8 1.57647058823529 67 39 76.5 2 61 255 608 672 WP_300623657.1 TonB-dependent receptor plug domain-containing protein [uncultured Megasphaera sp.] diamond 402 43.1 0.990719257540603 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera uncultured Megasphaera sp.
31501890 31501890 PRJNA576995_P_NODE_39396_length_246_cov_0.890173_g38804_i0 PRJNA576995 39396 246 0.890173 2.18982558 Atopostipes suicloacalis 180295 Bacteria Bacteria 130 2.49e-33   NR MDN6731783.1 180295 g38804 i0 78 1 82 17 100 1 1 246 96 176 MDN6731783.1 DUF2207 domain-containing protein [Atopostipes suicloacalis] diamond 246 130 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Atopostipes Atopostipes suicloacalis
31547053 31547053 PRJNA576995_P_NODE_32876_length_262_cov_1.222222_g32284_i0 PRJNA576995 32876 262 1.222222 3.20222164 Bacteria 2 Bacteria Bacteria 56.6 4.55e-7   NR MDD3307585.1 1872094 g32284 i0 38.5 6.54961832061069 78 44 84.7 1 229 8 40 117 MDD3307585.1 class I SAM-dependent methyltransferase [Acetobacterium sp.] diamond 1716 57 0.992982456140351 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Acetobacterium Acetobacterium sp.
31754652 31754652 PRJNA576995_P_NODE_29797_length_279_cov_1.495146_g29205_i0 PRJNA576995 29797 279 1.495146 4.17145734 Streptococcus sp. 1306 Bacteria Bacteria 97.4 2.4399999999999997e-24   NR MBK8156554.1 1306 g29205 i0 72.9 0.752688172043011 70 19 75.3 0 251 42 4 73 MBK8156554.1 hypothetical protein [Streptococcus sp.] diamond 210 97.4 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sp.
31754656 31754656 PRJNA576995_P_NODE_31537_length_270_cov_1.172589_g30945_i0 PRJNA576995 31537 270 1.172589 3.1659903 Clostridia bacterium 2044939 Bacteria Bacteria 42.7 0.0464   NR MBQ3085018.1 2044939 g30945 i0 48.7 0.433333333333333 39 20 43.3 0 234 118 64 102 MBQ3085018.1 glycoside hydrolase family 32 protein [Clostridia bacterium] diamond 117 42.7 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
32482565 32482565 PRJNA576995_P_NODE_30259_length_277_cov_0.946078_g29667_i0 PRJNA576995 30259 277 0.946078 2.62063606 Halanaerobiales bacterium 2094029 Bacteria Bacteria 43.5 0.0263   NR MCF8000500.1 2094029 g29667 i0 54.8 0.335740072202166 31 14 33.6 0 140 232 53 83 MCF8000500.1 ABC transporter permease [Halanaerobiales bacterium] diamond 93 43.5 1 Bacteria   Bacillati Bacillota Clostridia Halanaerobiales     Halanaerobiales bacterium
32734909 32734909 PRJNA576995_P_NODE_35900_length_250_cov_0.870056_g35308_i0 PRJNA576995 35900 250 0.870056 2.17514 Streptococcus sp. 1306 Bacteria Bacteria 71.2 1.54e-13   NR MBK8156506.1 1306 g35308 i0 63.2 0.684 57 21 68.4 0 78 248 1 57 MBK8156506.1 hypothetical protein [Streptococcus sp.] diamond 171 71.2 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sp.
32766142 32766142 PRJNA576995_P_NODE_41840_length_243_cov_0.905882_g41248_i0 PRJNA576995 41840 243 0.905882 2.20129326 Paenibacillus darwinianus 1380763 Bacteria Bacteria 83.2 4.99e-18   NR WP_036582271.1 1380763 g41248 i0 56.5 6.28395061728395 69 29 84 1 234 31 85 153 WP_036582271.1 glutathione peroxidase [Paenibacillus darwinianus] diamond 1527 83.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus darwinianus
32811180 32811180 PRJNA576995_P_NODE_37200_length_249_cov_0.869318_g36608_i0 PRJNA576995 37200 249 0.869318 2.16460182 Bacillales 1385 Bacteria Bacteria 130 7e-36   NR WP_342672208.1 298596 g36608 i0 72 1.97590361445783 82 23 98.8 0 248 3 73 154 WP_342672208.1 SOS response-associated peptidase [Sporosarcina ureilytica] diamond 492 130 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Sporosarcina Sporosarcina ureilytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;