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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA576995" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA576995 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26858463 26858463 PRJNA576995_P_NODE_7881_length_563_cov_1.165306_g7294_i0 PRJNA576995 7881 563 1.165306 6.56067278 Chloracidobacterium sp. 2099375 Bacteria Bacteria 46.6 0.0334   NR MBO0857070.1 2099375 g7294 i0 34.1 0.436944937833037 82 49 42.1 2 332 96 777 856 MBO0857070.1 TonB-dependent receptor [Chloracidobacterium sp.] diamond 246 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
27111008 27111008 PRJNA576995_P_NODE_13002_length_419_cov_1.112717_g12410_i0 PRJNA576995 13002 419 1.112717 4.66228423 Acidobacteriota bacterium 1978231 Bacteria Bacteria 66.6 1.12e-9   NR MDQ7006302.1 1978231 g12410 i0 32.1 0.98090692124105 137 86 95.9 3 403 2 207 339 MDQ7006302.1 hypothetical protein [Acidobacteriota bacterium] diamond 411 66.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27774711 27774711 PRJNA576995_P_NODE_28164_length_288_cov_1.018605_g27572_i0 PRJNA576995 28164 288 1.018605 2.9335824 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 43.1 0.0435   NR HSU81087.1 2651171 g27572 i0 39.7 0.760416666666667 73 35 66.7 3 275 84 113 185 HSU81087.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 219 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28153635 28153635 PRJNA576995_P_NODE_33145_length_260_cov_1.524064_g32553_i0 PRJNA576995 33145 260 1.524064 3.9625664 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 111 3.47e-27   NR NNE67555.1 2283092 g32553 i0 64.9 3.53076923076923 77 27 88.8 0 238 8 1 77 NNE67555.1 NAD(P)-dependent alcohol dehydrogenase [Pyrinomonadaceae bacterium] diamond 918 111 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29132387 29132387 PRJNA576995_P_NODE_43009_length_241_cov_0.916667_g42417_i0 PRJNA576995 43009 241 0.916667 2.20916747 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 78.6 1.57e-15   NR HEY0558441.1 2651171 g42417 i0 59.7 0.95850622406639 77 30 94.6 1 2 229 150 226 HEY0558441.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 231 78.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29668615 29668615 PRJNA576995_P_NODE_42550_length_242_cov_0.911243_g41958_i0 PRJNA576995 42550 242 0.911243 2.20520806 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.9 0.0144   NR HEX9423353.1 2283092 g41958 i0 38.7 0.768595041322314 62 33 76.9 2 53 238 495 551 HEX9423353.1 FAD-dependent oxidoreductase [Pyrinomonadaceae bacterium] diamond 186 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31881090 31881090 PRJNA576995_P_NODE_29017_length_283_cov_1.466667_g28425_i0 PRJNA576995 29017 283 1.466667 4.15066761 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.7 1.53e-8   NR MCU1289316.1 1978231 g28425 i0 44.9 1.80212014134276 69 38 73.1 0 1 207 99 167 MCU1289316.1 hspA 1 [Acidobacteriota bacterium] diamond 510 59.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32451066 32451066 PRJNA576995_P_NODE_43159_length_241_cov_0.916667_g42567_i0 PRJNA576995 43159 241 0.916667 2.20916747 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 101 1.81e-23   NR HLJ46112.1 2212468 g42567 i0 53.8 1.94190871369295 78 34 97.1 1 2 235 183 258 HLJ46112.1 NADP-dependent oxidoreductase [Bryobacteraceae bacterium] diamond 468 101 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32514361 32514361 PRJNA576995_P_NODE_34759_length_251_cov_0.865169_g34167_i0 PRJNA576995 34759 251 0.865169 2.17157419 Acidobacteriota bacterium 1978231 Bacteria Bacteria 160 3.5599999999999997e-48   NR MCI0390920.1 1978231 g34167 i0 94 0.99203187250996006 83 5 99.2 0 249 1 49 131 MCI0390920.1 TlpA family protein disulfide reductase [Acidobacteriota bacterium] diamond 249 160 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;