RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA575566" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27142392 27142392 PRJNA575566_P_NODE_28202_length_203_cov_1.338028_g28005_i0 PRJNA575566 28202 203 1.338028 2.71619684 Nanobdellota archaeon 2026764 Archaea Archaea 42 0.0061   NR MEK6857865.1 2026764 g28005 i0 54.3 0.517241379310345 35 15 50.2 1 141 40 29 63 MEK6857865.1 Kazal-type serine protease inhibitor domain-containing protein [Nanoarchaeota archaeon] diamond 105 42 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29650508 29650508 PRJNA575566_P_NODE_19450_length_238_cov_1.446328_g19253_i0 PRJNA575566 19450 238 1.446328 3.44226064 Nanobdellati 1783276 Archaea Archaea 99.8 2.1e-22   NR MDP6845833.1 2910166 g19253 i0 61 4.91596638655462 77 30 97.1 0 238 8 45 121 MDP6845833.1 IMP dehydrogenase [Candidatus Nanoarchaeia archaeon] diamond 1170 99.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;