RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA575566" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA575566 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3110837 3110837 PRJNA575566_P_NODE_13923_length_282_cov_1.158371_g13726_i0 PRJNA575566 13923 282 1.158371 3.26660622 Tremellomycetes 155616 Fungi Fungi 152 1.8199999999999999e-40   NR GHJ87648.1 104408 g13726 i0 70.7 15.6276595744681 92 27 97.9 0 280 5 16 107 GHJ87648.1 hypothetical protein NliqN6_4050 [Naganishia liquefaciens] diamond 4407 153 0.993464052287582 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia liquefaciens
8213023 8213023 PRJNA575566_P_NODE_14307_length_278_cov_1.364055_g14110_i0 PRJNA575566 14307 278 1.364055 3.7920729 Basidiomycota 5204 Fungi Fungi 121 6.93e-33   NR KAJ8293786.1 5286 g14110 i0 59.3 8.8705035971223 91 37 98.2 0 277 5 65 155 KAJ8293786.1 Ubiquitin-40S ribosomal protein S27a [Rhodotorula toruloides] diamond 2466 121 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
26618266 26618266 PRJNA575566_P_NODE_14781_length_274_cov_1.201878_g14584_i0 PRJNA575566 14781 274 1.201878 3.29314572 Opisthokonta 33154 Fungi Fungi 78.6 1.3e-14   NR CEQ39742.1 5005 g14584 i0 80.4 13.6970802919708 46 9 50.4 0 135 272 164 209 CEQ39742.1 SPOSA6832_01284 [Sporobolomyces salmonicolor] diamond 3753 79 0.994936708860759 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces salmonicolor
27725306 27725306 PRJNA575566_P_NODE_30384_length_191_cov_2.100000_g30187_i0 PRJNA575566 30384 191 2.1 4.011 Fungi 4751 Fungi Fungi 91.3 1.5e-19   NR CDZ96739.1 264483 g30187 i0 67.8 11.1832460732984 59 18 92.7 1 2 178 408 465 CDZ96739.1 eukaryotic translation elongation factor 2 [Phaffia rhodozyma] diamond 2136 92 0.992391304347826 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Mrakiaceae Phaffia Phaffia rhodozyma
28293153 28293153 PRJNA575566_P_NODE_21706_length_224_cov_1.092025_g21509_i0 PRJNA575566 21706 224 1.092025 2.446136 Eukaryota 2759 Fungi Fungi 79.3 1.75e-16   NR ORY92463.1 106004 g21509 i0 56.8 2.97321428571429 74 32 99.1 0 3 224 12 85 ORY92463.1 PCI domain-domain-containing protein [Leucosporidium creatinivorum] diamond 666 79.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium creatinivorum
30977920 30977920 PRJNA575566_P_NODE_9174_length_345_cov_1.200704_g8977_i0 PRJNA575566 9174 345 1.200704 4.1424288 Fungi 4751 Fungi Fungi 112 1.46e-28   NR KAH9983893.1 40490 g8977 i0 55 20.2608695652174 111 43 94.8 2 328 2 49 154 KAH9983893.1 ribosomal protein S19-domain-containing protein [Russula compacta] diamond 6990 113 0.991150442477876 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Russula Russula compacta
32116419 32116419 PRJNA575566_P_NODE_8758_length_354_cov_1.218430_g8561_i0 PRJNA575566 8758 354 1.21843 4.3132422 Fungi 4751 Fungi Fungi 73.6 4.29e-14   NR ORY28810.1 71784 g8561 i0 64.9 2.80508474576271 57 20 48.3 0 4 174 16 72 ORY28810.1 60s acidic ribosomal protein-domain-containing protein [Naematelia encephala] diamond 993 73.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Naemateliaceae Naematelia Naematelia encephala
32527870 32527870 PRJNA575566_P_NODE_3199_length_579_cov_1.606178_g3004_i0 PRJNA575566 3199 579 1.606178 9.29977062 Eukaryota 2759 Fungi Fungi 180 1.89e-52   NR XP_021872123.1 4999 g3004 i0 50.6 31.4559585492228 168 83 87 0 578 75 107 274 XP_021872123.1 putative 60S acidic ribosomal protein [Kockovaella imperatae] diamond 18213 181 0.994475138121547 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cuniculitremaceae Kockovaella Kockovaella imperatae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;