contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA573544" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26649758 | 26649758 | PRJNA573544_P_NODE_6061_length_250_cov_0.881356_g6043_i0 | PRJNA573544 | 6061 | 250 | 0.881356 | 2.20339 | Tahibacter | 1453544 | Bacteria | Bacteria | 132 | 1.2699999999999998e-35 | NR | HVH33847.1 | 2056211 | g6043 | i0 | 79.5 | 2.988 | 83 | 17 | 99.6 | 0 | 2 | 250 | 163 | 245 | HVH33847.1 ABC transporter permease [Tahibacter sp.] | diamond | 747 | 132 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Tahibacter | Tahibacter sp. | ||
| 26699477 | 26699477 | PRJNA573544_P_NODE_5861_length_251_cov_0.876404_g5843_i0 | PRJNA573544 | 5861 | 251 | 0.876404 | 2.19977404 | Pedobacter ureilyticus | 1393051 | Bacteria | Bacteria | 146 | 5.6599999999999986e-40 | NR | WP_138722565.1 | 1393051 | g5843 | i0 | 91.6 | 0.99203187250996006 | 83 | 7 | 99.2 | 0 | 1 | 249 | 189 | 271 | WP_138722565.1 tRNA lysidine(34) synthetase TilS [Pedobacter ureilyticus] | diamond | 249 | 146 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter ureilyticus | |
| 27661939 | 27661939 | PRJNA573544_P_NODE_6144_length_250_cov_0.881356_g6126_i0 | PRJNA573544 | 6144 | 250 | 0.881356 | 2.20339 | Sphingomonadaceae | 41297 | Bacteria | Bacteria | 163 | 1.58e-44 | NR | WP_062126125.1 | 152682 | g6126 | i0 | 100 | 1.92 | 80 | 0 | 96 | 0 | 248 | 9 | 782 | 861 | WP_062126125.1 type IV secretion system protein TraC [Sphingomonas melonis] | diamond | 480 | 163 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas melonis | ||
| 27743194 | 27743194 | PRJNA573544_P_NODE_5964_length_250_cov_1.316384_g5946_i0 | PRJNA573544 | 5964 | 250 | 1.316384 | 3.29096 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 77.4 | 1.33e-14 | NR | MCA9602532.1 | 2026763 | g5946 | i0 | 49.4 | 1.98 | 83 | 39 | 99.6 | 1 | 2 | 250 | 2 | 81 | MCA9602532.1 fatty acid desaturase [Myxococcales bacterium] | diamond | 495 | 77.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28406008 | 28406008 | PRJNA573544_P_NODE_5406_length_253_cov_0.866667_g5388_i0 | PRJNA573544 | 5406 | 253 | 0.866667 | 2.19266751 | Sphingomonas sp. TX | 28214 | Bacteria | Bacteria | 171 | 5.58e-48 | NR | WP_198356560.1 | 2479205 | g5388 | i0 | 100 | 0.99604743083004 | 84 | 0 | 99.6 | 0 | 252 | 1 | 81 | 164 | WP_198356560.1 phage terminase large subunit family protein, partial [Sphingomonas sp. TX0522] | diamond | 252 | 171 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. TX0522 | ||
| 28658713 | 28658713 | PRJNA573544_P_NODE_4987_length_260_cov_0.930481_g4969_i0 | PRJNA573544 | 4987 | 260 | 0.930481 | 2.4192506 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 45.1 | 0.00339 | NR | MBQ8149526.1 | 2044939 | g4969 | i0 | 48.7 | 0.45 | 39 | 20 | 45 | 0 | 50 | 166 | 80 | 118 | MBQ8149526.1 hypothetical protein [Clostridia bacterium] | diamond | 117 | 45.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28974441 | 28974441 | PRJNA573544_P_NODE_4708_length_267_cov_1.551546_g4690_i0 | PRJNA573544 | 4708 | 267 | 1.551546 | 4.14262782 | Micromonosporaceae bacterium | 1873464 | Bacteria | Bacteria | 44.7 | 0.0099 | NR | HEX6073767.1 | 1873464 | g4690 | i0 | 44.6 | 0.730337078651685 | 65 | 20 | 71.9 | 3 | 217 | 26 | 145 | 194 | HEX6073767.1 thiolase family protein [Micromonosporaceae bacterium] | diamond | 195 | 44.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonosporaceae bacterium | |||
| 29164001 | 29164001 | PRJNA573544_P_NODE_7029_length_246_cov_0.901734_g7011_i0 | PRJNA573544 | 7029 | 246 | 0.901734 | 2.21826564 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 87 | 1.02e-17 | NR | HHQ48671.1 | 1978231 | g7011 | i0 | 50 | 10.2439024390244 | 84 | 39 | 98.8 | 1 | 246 | 4 | 257 | 340 | HHQ48671.1 peptidase M4 [Acidobacteriota bacterium] | diamond | 2520 | 87 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30237518 | 30237518 | PRJNA573544_P_NODE_5652_length_252_cov_0.871508_g5634_i0 | PRJNA573544 | 5652 | 252 | 0.871508 | 2.19620016 | Deinococcus koreensis | 2054903 | Bacteria | Bacteria | 59.7 | 4.37e-8 | NR | WP_133161824.1 | 2054903 | g5634 | i0 | 44.3 | 0.833333333333333 | 70 | 31 | 73.8 | 1 | 232 | 47 | 642 | 711 | WP_133161824.1 hypothetical protein [Deinococcus koreensis] | diamond | 210 | 59.7 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus koreensis | ||
| 31501819 | 31501819 | PRJNA573544_P_NODE_7236_length_245_cov_0.906977_g7218_i0 | PRJNA573544 | 7236 | 245 | 0.906977 | 2.22209365 | Sphingomonas | 13687 | Bacteria | Bacteria | 129 | 1.87e-36 | NR | WP_203309122.1 | 13687 | g7218 | i0 | 100 | 0.808163265306122 | 66 | 0 | 80.8 | 0 | 243 | 46 | 57 | 122 | WP_203309122.1 MULTISPECIES: hypothetical protein [Sphingomonas] | diamond | 198 | 129 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | |||
| 32797422 | 32797422 | PRJNA573544_P_NODE_7020_length_246_cov_0.901734_g7002_i0 | PRJNA573544 | 7020 | 246 | 0.901734 | 2.21826564 | Candidatus Obscuribacter sp. | 2711154 | Bacteria | Bacteria | 164 | 2.0299999999999998e-47 | NR | HMY02784.1 | 2711154 | g7002 | i0 | 100 | 0.98780487804878 | 81 | 0 | 98.8 | 0 | 2 | 244 | 114 | 194 | HMY02784.1 hypothetical protein [Candidatus Obscuribacter sp.] | diamond | 243 | 164 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Obscuribacterales | Candidatus Obscuribacteraceae | Candidatus Obscuribacter | Candidatus Obscuribacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;