RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA572587" and tax_phylum = "Candidatus Walliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA572587 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27142356 27142356 PRJNA572587_P_NODE_12662_length_327_cov_17.017986_g12334_i0 PRJNA572587 12662 327 17.017986 55.64881422 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 55.1 1.9e-6   NR HOT77717.1 2053640 g12334 i0 100 0.495412844036697 27 0 24.8 0 23 103 43 69 HOT77717.1 tetratricopeptide repeat protein [Candidatus Wallbacteria bacterium] diamond 162 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
27427375 27427375 PRJNA572587_P_NODE_23503_length_232_cov_24.426230_g23175_i0 PRJNA572587 23503 232 24.42623 56.6688536 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 124 1.3e-34   NR HOT76928.1 2053640 g23175 i0 97.1 0.892241379310345 69 2 89.2 0 3 209 58 126 HOT76928.1 EamA family transporter [Candidatus Wallbacteria bacterium] diamond 207 124 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;