RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA572587" and tax_phylum = "Candidatus Aerophobota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aerophobota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA572587 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27300837 27300837 PRJNA572587_P_NODE_5723_length_522_cov_57.511628_g5403_i0 PRJNA572587 5723 522 57.511628 300.21069816 Candidatus Aerophobetes bacterium 2030807 Bacteria Bacteria 76.3 1.4e-12   NR PCI95766.1 2030807 g5403 i0 51.5 0.390804597701149 68 33 39.1 0 439 236 564 631 PCI95766.1 MAG: hypothetical protein COB11_01235 [Candidatus Aerophobetes bacterium] diamond 204 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium
28058580 28058580 PRJNA572587_P_NODE_26025_length_219_cov_19.235294_g25697_i0 PRJNA572587 26025 219 19.235294 42.12529386 Candidatus Aerophobota bacterium 2030807 Bacteria Bacteria 90.1 3.23e-19   NR MBC7190526.1 2030807 g25697 i0 72.4 0.794520547945205 58 16 79.5 0 182 9 301 358 MBC7190526.1 class I SAM-dependent DNA methyltransferase [Candidatus Aerophobetes bacterium] diamond 174 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;