RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA572587" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA572587 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26730940 26730940 PRJNA572587_P_NODE_37241_length_180_cov_5.900763_g36913_i0 PRJNA572587 37241 180 5.900763 10.6213734 Tonghua Totiv tick virus 1 2972347 Viruses Viruses 56.2 2.74e-7   NR UYL95652.1 2972347 g36913 i0 83.3 0.5 30 5 50 0 157 68 668 697 UYL95652.1 MAG: capsid protein [Tonghua Totiv tick virus 1] diamond 90 56.2 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Tonghua Totiv tick virus 1
29587474 29587474 PRJNA572587_P_NODE_21170_length_245_cov_40.372449_g20842_i0 PRJNA572587 21170 245 40.372449 98.91250005 Viruses 10239 Viruses Viruses 78.2 1.3e-14   NR QJI52028.1 1955144 g20842 i0 58.3 2.20408163265306 60 25 73.5 0 34 213 799 858 QJI52028.1 MAG: hypothetical protein 1 [Dicistroviridae sp.] diamond 540 78.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
29682184 29682184 PRJNA572587_P_NODE_15250_length_295_cov_1.841463_g14922_i0 PRJNA572587 15250 295 1.841463 5.43231585 Viruses 10239 Viruses Viruses 151 5.71e-40   NR QJI52028.1 1955144 g14922 i0 86.9 2.56271186440678 84 11 85.4 0 280 29 1576 1659 QJI52028.1 MAG: hypothetical protein 1 [Dicistroviridae sp.] diamond 756 151 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;