contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA572587" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28721779 | 28721779 | PRJNA572587_P_NODE_22827_length_236_cov_10.545455_g22499_i0 | PRJNA572587 | 22827 | 236 | 10.545455 | 24.8872738 | Archaeoglobaceae archaeon | 2511821 | Archaea | Archaea | 45.4 | 8.48e-4 | NR | MEM1673094.1 | 2511821 | g22499 | i0 | 70.4 | 0.343220338983051 | 27 | 8 | 34.3 | 0 | 233 | 153 | 57 | 83 | MEM1673094.1 hypothetical protein [Archaeoglobaceae archaeon] | diamond | 81 | 45.4 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Archaeoglobi | Archaeoglobales | Archaeoglobaceae | Archaeoglobaceae archaeon | |||
| 29384858 | 29384858 | PRJNA572587_P_NODE_32509_length_194_cov_13.662069_g32181_i0 | PRJNA572587 | 32509 | 194 | 13.662069 | 26.50441386 | Archaeoglobaceae archaeon | 2511821 | Archaea | Archaea | 45.1 | 0.00284 | NR | MEM1673090.1 | 2511821 | g32181 | i0 | 63.6 | 1.02061855670103 | 33 | 11 | 49.5 | 1 | 2 | 97 | 150 | 182 | MEM1673090.1 hypothetical protein [Archaeoglobaceae archaeon] | diamond | 198 | 45.1 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Archaeoglobi | Archaeoglobales | Archaeoglobaceae | Archaeoglobaceae archaeon | |||
| 29668526 | 29668526 | PRJNA572587_P_NODE_15550_length_291_cov_58.652893_g15222_i0 | PRJNA572587 | 15550 | 291 | 58.652893 | 170.67991863 | Archaeoglobaceae archaeon | 2511821 | Archaea | Archaea | 49.7 | 2.35e-4 | NR | MEM1673093.1 | 2511821 | g15222 | i0 | 43.5 | 0.711340206185567 | 69 | 33 | 66 | 2 | 273 | 82 | 1 | 68 | MEM1673093.1 hypothetical protein [Archaeoglobaceae archaeon] | diamond | 207 | 49.7 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Archaeoglobi | Archaeoglobales | Archaeoglobaceae | Archaeoglobaceae archaeon | |||
| 30377838 | 30377838 | PRJNA572587_P_NODE_27032_length_215_cov_2.126506_g26704_i0 | PRJNA572587 | 27032 | 215 | 2.126506 | 4.5719879 | root | 1 | Root_unresolved | Root_unresolved | 50.4 | 4.41e-5 | NR | MCD6448248.1 | 1906666 | g26704 | i0 | 51.9 | 3.64186046511628 | 52 | 24 | 71.2 | 1 | 200 | 48 | 8 | 59 | MCD6448248.1 recombinase family protein [Thermoplasmata archaeon] | diamond | 783 | 50.4 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Thermoplasmata archaeon | |||||
| 32811157 | 32811157 | PRJNA572587_P_NODE_19200_length_259_cov_17.847619_g18872_i0 | PRJNA572587 | 19200 | 259 | 17.847619 | 46.22533321 | Candidatus Methanoperedens | 1392997 | Archaea | Archaea | 109 | 1.03e-27 | NR | MCZ7393846.1 | 2032688 | g18872 | i0 | 66.3 | 3.35907335907336 | 80 | 27 | 92.7 | 0 | 2 | 241 | 29 | 108 | MCZ7393846.1 class I SAM-dependent methyltransferase [Candidatus Methanoperedens sp.] | diamond | 870 | 110 | 0.990909090909091 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Candidatus Methanoperedentaceae | Candidatus Methanoperedens | Candidatus Methanoperedens sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;