RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA565778" and tax_phylum = "Candidatus Kryptoniota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kryptoniota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565778 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31596725 31596725 PRJNA565778_S_NODE_25816_length_217_cov_59.494444_g25520_i0 PRJNA565778 25816 217 59.494444 129.10294348 Candidatus Chrysopegis kryptomonas 1633643 Bacteria Bacteria 85.5 3.14e-18   NR WP_092347279.1 1633643 g25520 i0 66.1 2.41935483870968 59 20 81.6 0 215 39 102 160 WP_092347279.1 type II restriction endonuclease [Candidatus Chrysopegis kryptomonas] diamond 525 85.5 1 Bacteria FCB group Pseudomonadati Candidatus Kryptoniota       Candidatus Chryseopegocella Candidatus Chryseopegocella kryptomonas

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;