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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA565778" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 5 ✖

bioproject 1

  • PRJNA565778 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27584977 27584977 PRJNA565778_S_NODE_21924_length_236_cov_152.160804_g21628_i0 PRJNA565778 21924 236 152.160804 359.09949744 Methanobrevibacter sp. 66852 Archaea Archaea 55.8 7.96e-7   NR MBO7694490.1 66852 g21628 i0 41.8 0.699152542372881 55 31 69.9 1 209 45 44 97 MBO7694490.1 hypothetical protein [Methanobrevibacter sp.] diamond 165 55.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29132276 29132276 PRJNA565778_S_NODE_12069_length_315_cov_14.205036_g11773_i0 PRJNA565778 12069 315 14.205036 44.7458634 Halobacteriota archaeon 3100168 Archaea Archaea 63.5 1.46e-9   NR MDY6960110.1 3100168 g11773 i0 34.7 1.7047619047619 95 61 90.5 1 304 20 65 158 MDY6960110.1 hypothetical protein [Halobacteriota archaeon] diamond 537 63.5 1 Archaea   Methanobacteriati Halobacteriota         Halobacteriota archaeon
30111053 30111053 PRJNA565778_S_NODE_16672_length_271_cov_5.743590_g16376_i0 PRJNA565778 16672 271 5.74359 15.5651289 Methanobacterium sp. 2164 Archaea Archaea 149 1.1999999999999999e-43   NR MCC7564372.1 2164 g16376 i0 96.2 0.874538745387454 79 3 87.5 0 239 3 5 83 MCC7564372.1 RNA-binding protein [Methanobacterium sp.] diamond 237 149 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30742969 30742969 PRJNA565778_S_NODE_15074_length_284_cov_12.137652_g14778_i0 PRJNA565778 15074 284 12.137652 34.47093168 Methanooceanicella nereidis 2052831 Archaea Archaea 56.2 1.01e-6   NR MCD1296376.1 2052831 g14778 i0 50 0.528169014084507 50 25 52.8 0 73 222 7 56 MCD1296376.1 transposase [Methanooceanicella nereidis] diamond 150 56.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanooceanicella Methanooceanicella nereidis
32432859 32432859 PRJNA565778_S_NODE_12299_length_312_cov_78.665455_g12003_i0 PRJNA565778 12299 312 78.665455 245.4362196 root 1 Root_unresolved Root_unresolved 54.7 4.26e-6   NR MBQ2653610.1 66852 g12003 i0 44.4 2.29807692307692 63 30 55.8 1 264 91 67 129 MBQ2653610.1 GIY-YIG nuclease family protein [Methanobrevibacter sp.] diamond 717 55.1 0.992740471869329 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;