RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA565778" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 8 ✖

bioproject 1

  • PRJNA565778 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20960676 20960676 PRJNA565778_S_NODE_7477_length_391_cov_5.090395_g7191_i0 PRJNA565778 7477 391 5.090395 19.90344445 Haematococcus lacustris 44745 Plants Plants 117 3.01e-29   NR KAJ9521824.1 44745 g7191 i0 96.7 1.79539641943734 60 2 46 0 120 299 103 162 KAJ9521824.1 hypothetical protein QJQ45_024688 [Haematococcus lacustris] diamond 702 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28387900 28387900 PRJNA565778_S_NODE_32306_length_192_cov_174.129032_g32010_i0 PRJNA565778 32306 192 174.129032 334.32774144 Eukaryota 2759 Plants Plants 55.5 6.08e-7   NR WIA23228.1 3088 g32010 i0 96.2 36.15625 26 1 40.6 0 78 155 706 731 WIA23228.1 hypothetical protein OEZ85_000001 [Tetradesmus obliquus] diamond 6942 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28847772 28847772 PRJNA565778_S_NODE_10368_length_337_cov_120.276667_g10072_i0 PRJNA565778 10368 337 120.276667 405.33236779 Trebouxia sp. A1-2 2608996 Plants Plants 52.8 2.83e-6   NR KAA6427132.1 2608996 g10072 i0 80 0.267062314540059 30 6 26.7 0 305 216 67 96 KAA6427132.1 MAG: 60S ribosomal L37 [Trebouxia sp. A1-2] diamond 90 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
30756637 30756637 PRJNA565778_S_NODE_9594_length_350_cov_90.948882_g9298_i0 PRJNA565778 9594 350 90.948882 318.321087 Chlorellales 35460 Plants Plants 59.3 2.53e-8   NR WPT17602.1 1470871 g9298 i0 79.4 1.74857142857143 34 7 29.1 0 312 211 108 141 WPT17602.1 40S ribosomal protein S12 [Picochlorum sp. SENEW3] diamond 612 59.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
31248517 31248517 PRJNA565778_S_NODE_1435_length_744_cov_171.531825_g1333_i0 PRJNA565778 1435 744 171.531825 1276.196778 Haematococcus lacustris 44745 Plants Plants 122 7.369999999999998e-32   NR GFH26145.1 44745 g1333 i0 91.4 0.326612903225806 81 7 32.7 0 712 470 4 84 GFH26145.1 hypothetical protein HaLaN_24245, partial [Haematococcus lacustris] diamond 243 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31406848 31406848 PRJNA565778_S_NODE_7576_length_389_cov_2.974432_g7290_i0 PRJNA565778 7576 389 2.974432 11.57054048 Haematococcus lacustris 44745 Plants Plants 91.7 6.38e-20   NR GFH30755.1 44745 g7290 i0 97.8 1.04113110539846 45 1 34.7 0 371 237 173 217 GFH30755.1 eukaryotic translation elongation factor 1 alpha [Haematococcus lacustris] diamond 405 91.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
31817802 31817802 PRJNA565778_S_NODE_10117_length_341_cov_104.542763_g9821_i0 PRJNA565778 10117 341 104.542763 356.49082183 Trebouxia sp. C 2796353 Plants Plants 96.7 2.659999999999999e-23   NR KAL3158313.1 3373144 g9821 i0 94 0.439882697947214 50 3 44 0 36 185 60 109 KAL3158313.1 hypothetical protein ABBQ38_010557 [Trebouxia sp. C0009 RCD-2024] diamond 150 96.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
32829198 32829198 PRJNA565778_S_NODE_18820_length_255_cov_101.284404_g18524_i0 PRJNA565778 18820 255 101.284404 258.2752302 Symbiochloris irregularis 706552 Plants Plants 110 2.799999999999999e-29   NR KAK9808445.1 706552 g18524 i0 85.7 3.91764705882353 56 8 65.9 0 216 49 36 91 KAK9808445.1 hypothetical protein WJX73_006634 [Symbiochloris irregularis] diamond 999 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;