RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA565584" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8210443 8210443 PRJNA565584_P_NODE_69167_length_357_cov_1.897887_g68016_i0 PRJNA565584 69167 357 1.897887 6.77545659 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 172 1.22e-47   NR XP_063715816.1 84072 g68016 i0 73.3 10.7226890756303 116 31 97.5 0 3 350 268 383 XP_063715816.1 endoplasmic reticulum chaperone BiP-like [Symsagittifera roscoffensis] diamond 3828 172 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
23507909 23507909 PRJNA565584_P_NODE_166499_length_251_cov_1.730337_g165347_i0 PRJNA565584 166499 251 1.730337 4.34314587 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.4 7.84e-11   NR XP_063719084.1 84072 g165347 i0 60.4 8.86852589641434 53 15 63.3 1 211 53 145 191 XP_063719084.1 eukaryotic initiation factor 4A-III [Symsagittifera roscoffensis] diamond 2226 67.4 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
26636222 26636222 PRJNA565584_P_NODE_70761_length_353_cov_1.860714_g69610_i0 PRJNA565584 70761 353 1.860714 6.56832042 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 47.4 0.00286   NR XP_063723580.1 84072 g69610 i0 31.8 0.560906515580737 66 44 56.1 1 328 131 347 411 XP_063723580.1 paladin-like [Symsagittifera roscoffensis] diamond 198 47.4 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
26744518 26744518 PRJNA565584_P_NODE_139321_length_269_cov_1.571429_g138169_i0 PRJNA565584 139321 269 1.571429 4.22714401 Metazoa 33208 Xenacoelomorpha other_Eukaryota 115 9.919999999999999e-28   NR XP_063727797.1 84072 g138169 i0 59.6 7.33828996282528 89 36 99.3 0 269 3 616 704 XP_063727797.1 GTP-binding protein 1-like [Symsagittifera roscoffensis] diamond 1974 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
27346149 27346149 PRJNA565584_P_NODE_37083_length_495_cov_1.888626_g35932_i0 PRJNA565584 37083 495 1.888626 9.3486987 Metazoa 33208 Xenacoelomorpha other_Eukaryota 180 5.04e-52   NR XP_063711112.1 84072 g35932 i0 58.4 4.48484848484848 149 59 88.5 3 439 2 1 149 XP_063711112.1 calreticulin-like [Symsagittifera roscoffensis] diamond 2220 180 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
27868988 27868988 PRJNA565584_P_NODE_83225_length_326_cov_1.213439_g82073_i0 PRJNA565584 83225 326 1.213439 3.95581114 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 60.5 1.6e-8   NR XP_063716883.1 84072 g82073 i0 33.6 1.96932515337423 107 20 98.5 2 6 326 12 67 XP_063716883.1 N-alpha-acetyltransferase 50-like [Symsagittifera roscoffensis] diamond 642 60.5 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
28798236 28798236 PRJNA565584_P_NODE_90887_length_311_cov_2.928571_g89735_i0 PRJNA565584 90887 311 2.928571 9.10785581 Metazoa 33208 Xenacoelomorpha other_Eukaryota 79 4.56e-15   NR XP_063710526.1 84072 g89735 i0 41.7 10.4083601286174 96 54 91.6 2 310 26 120 214 XP_063710526.1 eukaryotic translation initiation factor 4E type 2-like [Symsagittifera roscoffensis] diamond 3237 79 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
29921617 29921617 PRJNA565584_P_NODE_19711_length_717_cov_2.245342_g18611_i0 PRJNA565584 19711 717 2.245342 16.09910214 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 149 3.2e-40   NR XP_063710558.1 84072 g18611 i0 36.8 1 239 145 99.2 4 715 5 7 241 XP_063710558.1 carboxymethylenebutenolidase homolog [Symsagittifera roscoffensis] diamond 717 149 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
32811129 32811129 PRJNA565584_P_NODE_212920_length_241_cov_1.375000_g211768_i0 PRJNA565584 212920 241 1.375 3.31375 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 6.59e-28   NR XP_063722507.1 84072 g211768 i0 64.6 3.93360995850622 79 28 98.3 0 3 239 251 329 XP_063722507.1 major vault protein-like [Symsagittifera roscoffensis] diamond 948 116 0.991379310344828 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;