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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA565584" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA565584 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4383745 4383745 PRJNA565584_P_NODE_210984_length_242_cov_0.911243_g209832_i0 PRJNA565584 210984 242 0.911243 2.20520806 Nolandella sp. LAK-2 1908693 Tubulinea other_Eukaryota 119 4.369999999999999e-31   NR AFX73095.1 1260117 g209832 i0 78.2 1.95867768595041 78 17 96.7 0 3 236 151 228 AFX73095.1 elongation factor 2 alpha, partial [Nolandella sp. LAK-2012] diamond 474 119 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. LAK-2012
5658143 5658143 PRJNA565584_P_NODE_106025_length_291_cov_1.055046_g104873_i0 PRJNA565584 106025 291 1.055046 3.07018386 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 186 7.909999999999999e-55   NR BAN33737.1 931554 g104873 i0 94.8 11 97 5 100 0 1 291 65 161 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 3201 186 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
5658287 5658287 PRJNA565584_P_NODE_114565_length_285_cov_1.584906_g113413_i0 PRJNA565584 114565 285 1.584906 4.5169821 Amoeba proteus 5775 Tubulinea other_Eukaryota 159 4.669999999999999e-46   NR AFX84537.1 5775 g113413 i0 89.5 0.905263157894737 86 9 90.5 0 284 27 210 295 AFX84537.1 alpha tubulin, partial [Amoeba proteus] diamond 258 159 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
5659075 5659075 PRJNA565584_P_NODE_153845_length_260_cov_1.016043_g152693_i0 PRJNA565584 153845 260 1.016043 2.6417118 Amoeba proteus 5775 Tubulinea other_Eukaryota 148 6.39e-41   NR AAP88974.1 5775 g152693 i0 79.1 4.96153846153846 86 18 99.2 0 3 260 18 103 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 1290 148 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
5661738 5661738 PRJNA565584_P_NODE_96565_length_304_cov_2.134199_g95413_i0 PRJNA565584 96565 304 2.134199 6.48796496 Chaos carolinense 160823 Tubulinea other_Eukaryota 161 2.2299999999999994e-48   NR AFX73058.1 160823 g95413 i0 80.2 0.996710526315789 101 20 99.7 0 303 1 52 152 AFX73058.1 14-3-3 protein, partial [Chaos carolinense] diamond 303 161 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
6934980 6934980 PRJNA565584_P_NODE_40386_length_472_cov_1.538847_g39235_i0 PRJNA565584 40386 472 1.538847 7.26335784 Amoeba proteus 5775 Tubulinea other_Eukaryota 285 5.13e-93   NR AAP88974.1 5775 g39235 i0 87.8 0.991525423728814 156 19 99.2 0 3 470 205 360 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 468 285 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
8207315 8207315 PRJNA565584_P_NODE_106347_length_290_cov_2.110599_g105195_i0 PRJNA565584 106347 290 2.110599 6.1207371 Chaos carolinense 160823 Tubulinea other_Eukaryota 162 6.37e-49   NR AFX73058.1 160823 g105195 i0 81.3 0.993103448275862 96 18 99.3 0 2 289 12 107 AFX73058.1 14-3-3 protein, partial [Chaos carolinense] diamond 288 162 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
9483224 9483224 PRJNA565584_P_NODE_130948_length_275_cov_1.143564_g129796_i0 PRJNA565584 130948 275 1.143564 3.144801 Amoeba proteus 5775 Tubulinea other_Eukaryota 151 6.539999999999998e-42   NR AAD37351.1 5775 g129796 i0 80.2 0.992727272727273 91 18 99.3 0 2 274 106 196 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 273 151 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
9483915 9483915 PRJNA565584_P_NODE_16708_length_791_cov_2.545961_g15636_i0 PRJNA565584 16708 791 2.545961 20.13855151 Amoeba proteus 5775 Tubulinea other_Eukaryota 478 2.23e-167   NR AAP88974.1 5775 g15636 i0 86.7 0.997471554993679 263 35 99.7 0 791 3 18 280 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 789 478 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
14585856 14585856 PRJNA565584_P_NODE_4752_length_1567_cov_4.937082_g4248_i0 PRJNA565584 4752 1567 4.937082 77.36407494 Copromyxa protea 931554 Tubulinea other_Eukaryota 773 2.95e-278   NR BAN33737.1 931554 g4248 i0 81.7 2.63624760689215 464 79 87.7 1 36 1409 1 464 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 4131 773 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
16437897 16437897 PRJNA565584_P_NODE_6093_length_1386_cov_2.912414_g5465_i0 PRJNA565584 6093 1386 2.912414 40.36605804 Copromyxa protea 931554 Tubulinea other_Eukaryota 794 1.74e-287   NR BAN33737.1 931554 g5465 i0 84.7 0.993506493506494 459 67 98.7 1 1386 19 4 462 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1377 794 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
20261294 20261294 PRJNA565584_P_NODE_26396_length_602_cov_2.132325_g25256_i0 PRJNA565584 26396 602 2.132325 12.8365965 Amoeba proteus 5775 Tubulinea other_Eukaryota 311 1.51e-102   NR AAP88974.1 5775 g25256 i0 74 0.996677740863787 200 50 99.7 1 602 3 68 265 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 600 311 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
20960095 20960095 PRJNA565584_P_NODE_9477_length_1103_cov_3.429126_g8583_i0 PRJNA565584 9477 1103 3.429126 37.82325978 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 503 2.9899999999999995e-174   NR BAN33737.1 931554 g8583 i0 76.1 3.47053490480508 322 71 85.9 1 1102 155 142 463 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 3828 503 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
24782983 24782983 PRJNA565584_P_NODE_36840_length_497_cov_1.778302_g35689_i0 PRJNA565584 36840 497 1.778302 8.83816094 Amoeba proteus 5775 Tubulinea other_Eukaryota 286 1.8299999999999997e-93   NR AAP88974.1 5775 g35689 i0 84 0.983903420523139 163 26 98.4 0 9 497 224 386 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 489 286 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
27427315 27427315 PRJNA565584_P_NODE_54723_length_402_cov_1.167173_g53572_i0 PRJNA565584 54723 402 1.167173 4.69203546 Copromyxa protea 931554 Tubulinea other_Eukaryota 195 1.8499999999999997e-57   NR BAN33737.1 931554 g53572 i0 69.1 1.01492537313433 136 39 99.3 1 2 400 160 295 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 408 195 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
28089978 28089978 PRJNA565584_P_NODE_136445_length_271_cov_1.555556_g135293_i0 PRJNA565584 136445 271 1.555556 4.21555676 Amoeba proteus 5775 Tubulinea other_Eukaryota 168 9.59e-49   NR AAP88974.1 5775 g135293 i0 91 0.985239852398524 89 8 98.5 0 269 3 282 370 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 267 168 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
28247781 28247781 PRJNA565584_P_NODE_173746_length_250_cov_0.870056_g172594_i0 PRJNA565584 173746 250 0.870056 2.17514 Copromyxa protea 931554 Tubulinea other_Eukaryota 112 1.51e-28   NR AKA62191.1 931554 g172594 i0 66.7 0.972 81 27 97.2 0 6 248 81 161 AKA62191.1 putative rhodoquinone biosynthesis methyltransferase-like protein RQUA [Copromyxa protea] diamond 243 112 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
29226909 29226909 PRJNA565584_P_NODE_100309_length_298_cov_1.706667_g99157_i0 PRJNA565584 100309 298 1.706667 5.08586766 Chaos carolinense 160823 Tubulinea other_Eukaryota 176 5.59e-53   NR AFX73090.1 160823 g99157 i0 87.8 1.97315436241611 98 12 98.7 0 294 1 157 254 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 588 176 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense
29227004 29227004 PRJNA565584_P_NODE_215729_length_241_cov_0.916667_g214577_i0 PRJNA565584 215729 241 0.916667 2.20916747 Saccamoeba lacustris 704142 Tubulinea other_Eukaryota 131 4.8e-37   NR AFX73075.1 704142 g214577 i0 82.1 1.94190871369295 78 14 97.1 0 2 235 83 160 AFX73075.1 14-3-3 protein, partial [Saccamoeba lacustris] diamond 468 131 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba lacustris
29384656 29384656 PRJNA565584_P_NODE_10729_length_1026_cov_2.816369_g9792_i0 PRJNA565584 10729 1026 2.816369 28.89594594 Copromyxa protea 931554 Tubulinea other_Eukaryota 584 1.36e-206   NR BAN33737.1 931554 g9792 i0 82.3 1.00877192982456 345 58 100 1 1026 1 116 460 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 1035 584 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
29763394 29763394 PRJNA565584_P_NODE_5731_length_1432_cov_1.458425_g5121_i0 PRJNA565584 5731 1432 1.458425 20.884646 Amoeba proteus 5775 Tubulinea other_Eukaryota 435 2.09e-146   NR AAD37351.1 5775 g5121 i0 63.3 0.793994413407821 379 108 76.3 5 1135 44 4 366 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 1137 435 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
30269304 30269304 PRJNA565584_P_NODE_80252_length_332_cov_1.185328_g79101_i0 PRJNA565584 80252 332 1.185328 3.93528896 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 157 2.78e-47   NR AAX57202.1 5778 g79101 i0 65.1 1.96987951807229 109 38 98.5 0 330 4 15 123 AAX57202.1 vacuolar protein sorting protein 26, partial [Vermamoeba vermiformis] diamond 654 157 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
30584771 30584771 PRJNA565584_P_NODE_221253_length_229_cov_2.256410_g220101_i0 PRJNA565584 221253 229 2.25641 5.1671789 Copromyxa protea 931554 Tubulinea other_Eukaryota 130 1.15e-33   NR BAN33737.1 931554 g220101 i0 81.6 0.995633187772926 76 14 99.6 0 228 1 344 419 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 228 130 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
31153314 31153314 PRJNA565584_P_NODE_58075_length_390_cov_1.511041_g56924_i0 PRJNA565584 58075 390 1.511041 5.8930599 Amoeba proteus 5775 Tubulinea other_Eukaryota 217 8.98e-70   NR AAW58116.1 5775 g56924 i0 79.8 0.992307692307692 129 26 99.2 0 3 389 33 161 AAW58116.1 peroxiredoxin, partial [Amoeba proteus] diamond 387 217 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
31564977 31564977 PRJNA565584_P_NODE_16976_length_784_cov_2.654008_g15902_i0 PRJNA565584 16976 784 2.654008 20.80742272 Copromyxa protea 931554 Tubulinea other_Eukaryota 437 4.29e-150   NR BAN33737.1 931554 g15902 i0 80.6 1.00637755102041 263 48 99.5 1 4 783 192 454 BAN33737.1 elongation factor-like protein [Copromyxa protea] diamond 789 437 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
32324360 32324360 PRJNA565584_P_NODE_172299_length_250_cov_0.870056_g171147_i0 PRJNA565584 172299 250 0.870056 2.17514 Amoeba proteus 5775 Tubulinea other_Eukaryota 97.1 3.2500000000000003e-21   NR ABD16178.1 5775 g171147 i0 57.9 0.912 76 32 91.2 0 249 22 10 85 ABD16178.1 110 kDa actin binding protein interacting with anti-filamin antibody [Amoeba proteus] diamond 228 97.1 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32797241 32797241 PRJNA565584_P_NODE_152340_length_261_cov_1.015957_g151188_i0 PRJNA565584 152340 261 1.015957 2.65164777 Chaos carolinense 160823 Tubulinea other_Eukaryota 167 1.95e-49   NR AFX73090.1 160823 g151188 i0 95.3 0.988505747126437 86 4 98.9 0 3 260 17 102 AFX73090.1 elongation factor 2 alpha, partial [Chaos carolinense] diamond 258 167 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Chaos Chaos carolinense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;