RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA565584" and tax_phylum = "Phoronida"

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tax_superkingdom 1

tax_phylum 1

  • Phoronida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13310894 13310894 PRJNA565584_P_NODE_40451_length_471_cov_4.439698_g39300_i0 PRJNA565584 40451 471 4.439698 20.91097758 Phoronis muelleri 478209 Phoronida other_Eukaryota 79.3 7.37e-16   NR ACD65187.1 478209 g39300 i0 53.6 1.09554140127389 110 51 70.1 0 375 46 1 110 ACD65187.1 putative 60S ribosomal protein RPLP1 [Phoronis muelleri] diamond 516 79.3 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri
28784582 28784582 PRJNA565584_P_NODE_48127_length_429_cov_7.148876_g46976_i0 PRJNA565584 48127 429 7.148876 30.66867804 Phoronis muelleri 478209 Phoronida other_Eukaryota 80.1 2.33e-16   NR ACD65187.1 478209 g46976 i0 66.7 0.41958041958042 60 20 42 0 352 173 1 60 ACD65187.1 putative 60S ribosomal protein RPLP1 [Phoronis muelleri] diamond 180 80.1 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri
30521789 30521789 PRJNA565584_P_NODE_95273_length_307_cov_0.961538_g94121_i0 PRJNA565584 95273 307 0.961538 2.95192166 Phoronis muelleri 478209 Phoronida other_Eukaryota 80.1 5.99e-17   NR ACD65187.1 478209 g94121 i0 66.7 1.19218241042345 60 20 58.6 0 240 61 1 60 ACD65187.1 putative 60S ribosomal protein RPLP1 [Phoronis muelleri] diamond 366 80.1 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;