RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA565584" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
554439 554439 PRJNA565584_P_NODE_113881_length_286_cov_1.084507_g112729_i0 PRJNA565584 113881 286 1.084507 3.10169002 Fungi 4751 Fungi Fungi 135 4.53e-36   NR KAG5462558.1 278681 g112729 i0 67.3 13.1853146853147 98 28 98.6 1 284 3 76 173 KAG5462558.1 MAG: lactate/malate dehydrogenase [Olpidium bornovanus] diamond 3771 136 0.992647058823529 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
9483335 9483335 PRJNA565584_P_NODE_136448_length_271_cov_1.555556_g135296_i0 PRJNA565584 136448 271 1.555556 4.21555676 Olpidium bornovanus 278681 Fungi Fungi 98.6 5.38e-22   NR KAG5463111.1 278681 g135296 i0 73.3 0.664206642066421 60 16 66.4 0 264 85 140 199 KAG5463111.1 MAG: LOW QUALITY PROTEIN: WD40-repeat-containing domain protein, partial [Olpidium bornovanus] diamond 180 98.6 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
26794571 26794571 PRJNA565584_P_NODE_154941_length_259_cov_1.467742_g153789_i0 PRJNA565584 154941 259 1.467742 3.80145178 Olpidium bornovanus 278681 Fungi Fungi 66.6 2.99e-11   NR KAG5457892.1 278681 g153789 i0 44.7 4.86486486486486 85 45 96.1 2 251 3 5 89 KAG5457892.1 MAG: eukaryotic porin-domain-containing protein, partial [Olpidium bornovanus] diamond 1260 66.6 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
27711597 27711597 PRJNA565584_P_NODE_129084_length_276_cov_1.413793_g127932_i0 PRJNA565584 129084 276 1.413793 3.90206868 Olpidium bornovanus 278681 Fungi Fungi 75.5 4.67e-14   NR KAG5456642.1 278681 g127932 i0 46.7 0.978260869565217 90 48 97.8 0 5 274 105 194 KAG5456642.1 MAG: LOW QUALITY PROTEIN: hypothetical protein BJ554DRAFT_3562 [Olpidium bornovanus] diamond 270 75.5 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28040692 28040692 PRJNA565584_P_NODE_103985_length_293_cov_1.050000_g102833_i0 PRJNA565584 103985 293 1.05 3.0765 Eukaryota 2759 Fungi Fungi 159 1.0199999999999999e-43   NR BAL15351.1 278681 g102833 i0 78.4 1.98634812286689 97 21 99.3 0 292 2 134 230 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 582 159 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28437618 28437618 PRJNA565584_P_NODE_98346_length_301_cov_2.000000_g97194_i0 PRJNA565584 98346 301 2 6.02 Olpidium bornovanus 278681 Fungi Fungi 63.9 1.68e-9   NR KAG5461474.1 278681 g97194 i0 43.7 0.867109634551495 87 43 84.7 2 264 10 99 181 KAG5461474.1 MAG: dedicator of cytokinesis 6, isoform CRA_e, partial [Olpidium bornovanus] diamond 261 63.9 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28753049 28753049 PRJNA565584_P_NODE_104747_length_292_cov_1.757991_g103595_i0 PRJNA565584 104747 292 1.757991 5.13333372 Olpidium bornovanus 278681 Fungi Fungi 95.5 1.92e-22   NR KAG5463654.1 278681 g103595 i0 71.6 1.36643835616438 67 19 68.8 0 291 91 100 166 KAG5463654.1 MAG: ribosomal protein L18e/L15P, partial [Olpidium bornovanus] diamond 399 95.5 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31103985 31103985 PRJNA565584_P_NODE_142455_length_267_cov_1.587629_g141303_i0 PRJNA565584 142455 267 1.587629 4.23896943 Fungi 4751 Fungi Fungi 146 1.5e-42   NR KAG5463394.1 278681 g141303 i0 76.1 15.7415730337079 88 21 98.9 0 267 4 34 121 KAG5463394.1 MAG: 60S ribosomal protein L16, partial [Olpidium bornovanus] diamond 4203 146 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31216486 31216486 PRJNA565584_P_NODE_61335_length_379_cov_2.156863_g60184_i0 PRJNA565584 61335 379 2.156863 8.17451077 Olpidium bornovanus 278681 Fungi Fungi 122 8.9e-32   NR KAG5455917.1 278681 g60184 i0 55.7 5.4934036939314 115 48 89.4 2 378 40 99 212 KAG5455917.1 MAG: ribosomal protein S7e-domain-containing protein [Olpidium bornovanus] diamond 2082 122 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;