RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA565584" and tax_phylum = "Candidatus Freyarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Freyarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA565584 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29826629 29826629 PRJNA565584_P_NODE_50951_length_417_cov_1.040698_g49800_i0 PRJNA565584 50951 417 1.040698 4.33971066 Candidatus Freyarchaeota archaeon SRVP19_Freyarchaeia-1 3402145 Archaea Archaea 45.4 0.0236   NR WXG40936.1 3126528 g49800 i0 24.1 0.956834532374101 133 94 95 3 6 401 47 173 WXG40936.1 MAG: tRNA (guanine(10)-N(2))-dimethyltransferase [Candidatus Freyarchaeota archaeon SRVP19_Freyarchaeia-1] diamond 399 45.4 1 Archaea   Promethearchaeati Candidatus Freyarchaeota         Candidatus Freyarchaeota archaeon SRVP19_Freyarchaeia-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;