RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA564810" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564810 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3105049 3105049 PRJNA564810_S_NODE_623_length_463_cov_5.899497_g601_i0 PRJNA564810 623 463 5.899497 27.31467111 Rhizophlyctis rosea 64517 Fungi Fungi 66.2 8.69e-10   NR KAJ3038683.1 64517 g601 i0 45 0.83585313174946 80 42 51.8 1 463 224 163 240 KAJ3038683.1 hypothetical protein HDV00_000432 [Rhizophlyctis rosea] diamond 387 66.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
10758539 10758539 PRJNA564810_S_NODE_3609_length_282_cov_1.843318_g3587_i0 PRJNA564810 3609 282 1.843318 5.19815676 root 1 Root_unresolved Root_unresolved 110 3.67e-26   NR XP_031026059.1 1806994 g3587 i0 74.7 3.98936170212766 75 19 79.8 0 3 227 405 479 XP_031026059.1 uncharacterized protein SmJEL517_g02169 [Synchytrium microbalum] diamond 1125 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
26636057 26636057 PRJNA564810_S_NODE_6001_length_237_cov_1.697674_g5979_i0 PRJNA564810 6001 237 1.697674 4.02348738 Hyaloraphidium curvatum 82268 Fungi Fungi 88.2 2.49e-18   NR KAI9019052.1 82268 g5979 i0 49.3 1.82278481012658 75 38 94.9 0 12 236 328 402 KAI9019052.1 hypothetical protein DFJ74DRAFT_708251 [Hyaloraphidium curvatum] diamond 432 88.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
27995366 27995366 PRJNA564810_S_NODE_6685_length_227_cov_1.679012_g6663_i0 PRJNA564810 6685 227 1.679012 3.81135724 Zopfochytrium polystomum 2211651 Fungi Fungi 107 1.38e-25   NR KAI9361196.1 2211651 g6663 i0 62.3 0.911894273127753 69 26 91.2 0 3 209 312 380 KAI9361196.1 cytochrome P450 [Zopfochytrium polystomum] diamond 207 107 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
28184487 28184487 PRJNA564810_S_NODE_4766_length_258_cov_1.020725_g4744_i0 PRJNA564810 4766 258 1.020725 2.6334705 Zopfochytrium polystomum 2211651 Fungi Fungi 68.9 2.58e-11   NR KAI9347176.1 2211651 g4744 i0 77.5 2.32558139534884 40 9 46.5 0 257 138 481 520 KAI9347176.1 acyl-CoA dehydrogenase/oxidase [Zopfochytrium polystomum] diamond 600 68.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
29429610 29429610 PRJNA564810_S_NODE_1209_length_384_cov_2.849530_g1187_i0 PRJNA564810 1209 384 2.84953 10.9421952 Fungi 4751 Fungi Fungi 173 1.4299999999999996e-52   NR KAI8800735.1 109936 g1187 i0 65.4 2.953125 127 44 99.2 0 2 382 41 167 KAI8800735.1 AAA domain-containing protein [Cladochytrium replicatum] diamond 1134 173 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
30269152 30269152 PRJNA564810_S_NODE_2192_length_328_cov_2.844106_g2170_i0 PRJNA564810 2192 328 2.844106 9.32866768 Nowakowskiella sp. JEL 2012159 Fungi Fungi 63.5 4.88e-9   NR KAJ3120073.1 2732418 g2170 i0 48.3 2.77134146341463 60 27 54.9 1 182 3 1 56 KAJ3120073.1 spindle assembly checkpoint kinase [Nowakowskiella sp. JEL0407] diamond 909 63.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0407
31975845 31975845 PRJNA564810_S_NODE_1378_length_371_cov_1.892157_g1356_i0 PRJNA564810 1378 371 1.892157 7.01990247 Hyaloraphidium curvatum 82268 Fungi Fungi 74.7 9.58e-13   NR KAI9021058.1 82268 g1356 i0 45.4 0.784366576819407 97 48 76.8 4 3 287 411 504 KAI9021058.1 hypothetical protein DFJ74DRAFT_671656 [Hyaloraphidium curvatum] diamond 291 74.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32324303 32324303 PRJNA564810_S_NODE_3879_length_276_cov_1.265403_g3857_i0 PRJNA564810 3879 276 1.265403 3.49251228 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 63.5 2.36e-9   NR KAH9259650.1 1357716 g3857 i0 58.2 1.17391304347826 55 22 59.8 1 1 165 298 351 KAH9259650.1 hypothetical protein BASA81_002072 [Batrachochytrium salamandrivorans] diamond 324 63.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;