contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA564810" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9482538 | 9482538 | PRJNA564810_S_NODE_1308_length_376_cov_5.691318_g1286_i0 | PRJNA564810 | 1308 | 376 | 5.691318 | 21.39935568 | Hathewaya histolytica | 1498 | Bacteria | Bacteria | 87.8 | 1.72e-17 | NR | WP_171012051.1 | 1498 | g1286 | i0 | 44.3 | 0.917553191489362 | 115 | 62 | 91.8 | 2 | 3 | 347 | 291 | 403 | WP_171012051.1 BppU family phage baseplate upper protein [Hathewaya histolytica] | diamond | 345 | 87.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Hathewaya | Hathewaya histolytica | ||
| 26903361 | 26903361 | PRJNA564810_S_NODE_3861_length_276_cov_2.279621_g3839_i0 | PRJNA564810 | 3861 | 276 | 2.279621 | 6.29175396 | Bacillati | 1783272 | Bacteria | Bacteria | 48.5 | 5.09e-4 | NR | WP_085832162.1 | 1958780 | g3839 | i0 | 49 | 1.32608695652174 | 51 | 20 | 55.4 | 2 | 274 | 122 | 711 | 755 | WP_085832162.1 YfhO family protein [Clostridium merdae] | diamond | 366 | 48.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium merdae | ||
| 27110747 | 27110747 | PRJNA564810_S_NODE_1682_length_352_cov_1.184669_g1660_i0 | PRJNA564810 | 1682 | 352 | 1.184669 | 4.17003488 | Clostridium botulinum | 1491 | Bacteria | Bacteria | 186 | 7.66e-53 | NR | WP_230869856.1 | 1491 | g1660 | i0 | 80.5 | 8.70170454545454 | 113 | 22 | 96.3 | 0 | 13 | 351 | 248 | 360 | WP_230869856.1 NACHT domain-containing protein [Clostridium botulinum] | diamond | 3063 | 186 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 28089944 | 28089944 | PRJNA564810_S_NODE_6885_length_224_cov_3.138365_g6863_i0 | PRJNA564810 | 6885 | 224 | 3.138365 | 7.0299376 | Sporosalibacterium faouarense | 516123 | Bacteria | Bacteria | 63.9 | 1.39e-10 | NR | WP_202707238.1 | 516123 | g6863 | i0 | 55.8 | 1.19196428571429 | 43 | 19 | 57.6 | 0 | 215 | 87 | 117 | 159 | WP_202707238.1 TspO/MBR family protein [Sporosalibacterium faouarense] | diamond | 267 | 63.9 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Thermohalobacteraceae | Sporosalibacterium | Sporosalibacterium faouarense | ||
| 29068979 | 29068979 | PRJNA564810_S_NODE_5548_length_244_cov_1.899441_g5526_i0 | PRJNA564810 | 5548 | 244 | 1.899441 | 4.63463604 | Brevibacillus dissolubilis | 1844116 | Bacteria | Bacteria | 54.7 | 2.24e-6 | NR | WP_139490473.1 | 1844116 | g5526 | i0 | 51.8 | 0.688524590163934 | 56 | 26 | 68.9 | 1 | 242 | 75 | 580 | 634 | WP_139490473.1 CocE/NonD family hydrolase [Brevibacillus dissolubilis] | diamond | 168 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus dissolubilis | ||
| 29258010 | 29258010 | PRJNA564810_S_NODE_4049_length_272_cov_1.811594_g4027_i0 | PRJNA564810 | 4049 | 272 | 1.811594 | 4.92753568 | Clostridium diolis | 223919 | Bacteria | Bacteria | 157 | 1.4200000000000001e-44 | NR | WP_179207979.1 | 223919 | g4027 | i0 | 80 | 1.98529411764706 | 90 | 18 | 99.3 | 0 | 2 | 271 | 76 | 165 | WP_179207979.1 hypothetical protein [Clostridium diolis] | diamond | 540 | 157 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium diolis | ||
| 30174005 | 30174005 | PRJNA564810_S_NODE_7812_length_215_cov_0.906667_g7790_i0 | PRJNA564810 | 7812 | 215 | 0.906667 | 1.94933405 | Clostridium sp. | 1506 | Bacteria | Bacteria | 132 | 8.89e-36 | NR | WP_367664529.1 | 1506 | g7790 | i0 | 88.7 | 1.98139534883721 | 71 | 8 | 99.1 | 0 | 213 | 1 | 175 | 245 | WP_367664529.1 ABC transporter ATP-binding protein [Clostridium sp.] | diamond | 426 | 132 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. | ||
| 30535345 | 30535345 | PRJNA564810_S_NODE_5553_length_244_cov_1.519553_g5531_i0 | PRJNA564810 | 5553 | 244 | 1.519553 | 3.70770932 | Bacilli | 91061 | Bacteria | Bacteria | 50.8 | 2.42e-5 | NR | WP_256237718.1 | 2806345 | g5531 | i0 | 52.4 | 2.95081967213115 | 42 | 20 | 51.6 | 0 | 2 | 127 | 126 | 167 | WP_256237718.1 50S ribosomal protein L6 [Bacillus sp. EB600] | diamond | 720 | 50.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. EB600 | ||
| 32039233 | 32039233 | PRJNA564810_S_NODE_3958_length_274_cov_2.000000_g3936_i0 | PRJNA564810 | 3958 | 274 | 2 | 5.48 | Hathewaya histolytica | 1498 | Bacteria | Bacteria | 87.8 | 1.01e-18 | NR | WP_138209604.1 | 1498 | g3936 | i0 | 67.7 | 0.678832116788321 | 62 | 20 | 67.9 | 0 | 87 | 272 | 75 | 136 | WP_138209604.1 Tim44 domain-containing protein [Hathewaya histolytica] | diamond | 186 | 87.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Hathewaya | Hathewaya histolytica | ||
| 32545685 | 32545685 | PRJNA564810_S_NODE_2459_length_317_cov_1.349206_g2437_i0 | PRJNA564810 | 2459 | 317 | 1.349206 | 4.27698302 | Clostridium hydrogeniformans | 349933 | Bacteria | Bacteria | 188 | 5.83e-57 | NR | WP_034849062.1 | 349933 | g2437 | i0 | 92.4 | 0.993690851735016 | 105 | 8 | 99.4 | 0 | 315 | 1 | 214 | 318 | WP_034849062.1 ABC transporter permease subunit [Clostridium hydrogeniformans] | diamond | 315 | 188 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium hydrogeniformans | ||
| 32829024 | 32829024 | PRJNA564810_S_NODE_2620_length_311_cov_1.516260_g2598_i0 | PRJNA564810 | 2620 | 311 | 1.51626 | 4.7155686 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 47 | 0.00249 | NR | WP_190346037.1 | 1280 | g2598 | i0 | 50 | 0.92604501607717 | 96 | 24 | 89.7 | 4 | 32 | 310 | 290 | 364 | WP_190346037.1 hypothetical protein, partial [Staphylococcus aureus] | diamond | 288 | 47 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;