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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA564810" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 32 ✖

bioproject 1

  • PRJNA564810 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5657991 5657991 PRJNA564810_S_NODE_5685_length_242_cov_1.536723_g5663_i0 PRJNA564810 5685 242 1.536723 3.71886966 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 156 1.99e-44   NR WP_106367299.1 2107693 g5663 i0 97.5 19.8347107438017 80 2 99.2 0 242 3 172 251 WP_106367299.1 recombinase RecA [Chlorogloea sp. CCALA 695] diamond 4800 156 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
8207119 8207119 PRJNA564810_S_NODE_3307_length_290_cov_1.813333_g3285_i0 PRJNA564810 3307 290 1.813333 5.2586657 Synechocystis sp. PCC 75 1143 Bacteria Bacteria 182 1.58e-53   NR WP_009634238.1 927677 g3285 i0 97.9 0.993103448275862 96 2 99.3 0 1 288 84 179 WP_009634238.1 preprotein translocase subunit SecY [Synechocystis sp. PCC 7509] diamond 288 182 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Merismopediaceae Synechocystis Synechocystis sp. PCC 7509
9482538 9482538 PRJNA564810_S_NODE_1308_length_376_cov_5.691318_g1286_i0 PRJNA564810 1308 376 5.691318 21.39935568 Hathewaya histolytica 1498 Bacteria Bacteria 87.8 1.72e-17   NR WP_171012051.1 1498 g1286 i0 44.3 0.917553191489362 115 62 91.8 2 3 347 291 403 WP_171012051.1 BppU family phage baseplate upper protein [Hathewaya histolytica] diamond 345 87.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Hathewaya Hathewaya histolytica
18406193 18406193 PRJNA564810_S_NODE_2415_length_318_cov_3.699605_g2393_i0 PRJNA564810 2415 318 3.699605 11.7647439 Amycolatopsis 1813 Bacteria Bacteria 102 4.7399999999999997e-23   NR WP_366579659.1 3156765 g2393 i0 60.7 1.58490566037736 84 33 79.2 0 316 65 309 392 WP_366579659.1 S8 family peptidase [Amycolatopsis sp. NPDC047767] diamond 504 102 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Amycolatopsis Amycolatopsis sp. NPDC047767
26636056 26636056 PRJNA564810_S_NODE_4061_length_272_cov_0.985507_g4039_i0 PRJNA564810 4061 272 0.985507 2.68057904 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 105 1.32e-25   NR WP_106367335.1 2107693 g4039 i0 77.9 0.75 68 15 75 0 272 69 200 267 WP_106367335.1 pyridine nucleotide transhydrogenase [Chlorogloea sp. CCALA 695] diamond 204 105 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
26794524 26794524 PRJNA564810_S_NODE_2881_length_302_cov_2.506329_g2859_i0 PRJNA564810 2881 302 2.506329 7.56911358 Anaerolineales bacterium 2073117 Bacteria Bacteria 73.2 8.96e-13   NR MCC7359436.1 2073117 g2859 i0 43.2 1.45033112582781 74 41 73.5 1 17 238 228 300 MCC7359436.1 patatin-like phospholipase family protein [Anaerolineales bacterium] diamond 438 73.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
26903361 26903361 PRJNA564810_S_NODE_3861_length_276_cov_2.279621_g3839_i0 PRJNA564810 3861 276 2.279621 6.29175396 Bacillati 1783272 Bacteria Bacteria 48.5 5.09e-4   NR WP_085832162.1 1958780 g3839 i0 49 1.32608695652174 51 20 55.4 2 274 122 711 755 WP_085832162.1 YfhO family protein [Clostridium merdae] diamond 366 48.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium merdae
27110747 27110747 PRJNA564810_S_NODE_1682_length_352_cov_1.184669_g1660_i0 PRJNA564810 1682 352 1.184669 4.17003488 Clostridium botulinum 1491 Bacteria Bacteria 186 7.66e-53   NR WP_230869856.1 1491 g1660 i0 80.5 8.70170454545454 113 22 96.3 0 13 351 248 360 WP_230869856.1 NACHT domain-containing protein [Clostridium botulinum] diamond 3063 186 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium botulinum
28089944 28089944 PRJNA564810_S_NODE_6885_length_224_cov_3.138365_g6863_i0 PRJNA564810 6885 224 3.138365 7.0299376 Sporosalibacterium faouarense 516123 Bacteria Bacteria 63.9 1.39e-10   NR WP_202707238.1 516123 g6863 i0 55.8 1.19196428571429 43 19 57.6 0 215 87 117 159 WP_202707238.1 TspO/MBR family protein [Sporosalibacterium faouarense] diamond 267 63.9 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Thermohalobacteraceae Sporosalibacterium Sporosalibacterium faouarense
28216065 28216065 PRJNA564810_S_NODE_6326_length_232_cov_2.035928_g6304_i0 PRJNA564810 6326 232 2.035928 4.72335296 Nostocales cyanobacterium HT-58-2 1940762 Bacteria Bacteria 91.7 7.75e-20   NR ARV61053.1 1940762 g6304 i0 56.3 4.17672413793103 64 28 82.8 0 17 208 291 354 ARV61053.1 hypothetical protein BZZ01_22695 [Nostocales cyanobacterium HT-58-2] diamond 969 91.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales     Nostocales cyanobacterium HT-58-2
28469086 28469086 PRJNA564810_S_NODE_5206_length_250_cov_1.102703_g5184_i0 PRJNA564810 5206 250 1.102703 2.7567575 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 156 5.439999999999999e-43   NR WP_106369171.1 2107693 g5184 i0 88 0.996 83 10 99.6 0 249 1 21 103 WP_106369171.1 GspE/PulE family protein [Chlorogloea sp. CCALA 695] diamond 249 156 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
28626990 28626990 PRJNA564810_S_NODE_5687_length_242_cov_1.531073_g5665_i0 PRJNA564810 5687 242 1.531073 3.70519666 Chroococcus sp. CMT-3BRIN-NPC107 2499659 Bacteria Bacteria 55.8 5.62e-7   NR MBW4663526.1 2499659 g5665 i0 50.9 0.681818181818182 55 26 66.9 1 5 166 10 64 MBW4663526.1 hypothetical protein [Chroococcus sp. CMT-3BRIN-NPC107] diamond 165 55.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Chroococcaceae Chroococcus Chroococcus sp. CMT-3BRIN-NPC107
28879252 28879252 PRJNA564810_S_NODE_5688_length_242_cov_1.468927_g5666_i0 PRJNA564810 5688 242 1.468927 3.55480334 Mycoplasma wenyonii 65123 Bacteria Bacteria 90.1 2.88e-20   NR WP_014849828.1 65123 g5666 i0 55.6 0.892561983471074 72 32 89.3 0 2 217 76 147 WP_014849828.1 hypothetical protein [Mycoplasma wenyonii] diamond 216 90.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
28974221 28974221 PRJNA564810_S_NODE_7688_length_216_cov_1.350993_g7666_i0 PRJNA564810 7688 216 1.350993 2.91814488 Mycoplasma wenyonii 65123 Bacteria Bacteria 42.7 0.026   NR WP_014849782.1 65123 g7666 i0 51.1 0.625 45 21 62.5 1 135 1 244 287 WP_014849782.1 hypothetical protein [Mycoplasma wenyonii] diamond 135 42.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
29068979 29068979 PRJNA564810_S_NODE_5548_length_244_cov_1.899441_g5526_i0 PRJNA564810 5548 244 1.899441 4.63463604 Brevibacillus dissolubilis 1844116 Bacteria Bacteria 54.7 2.24e-6   NR WP_139490473.1 1844116 g5526 i0 51.8 0.688524590163934 56 26 68.9 1 242 75 580 634 WP_139490473.1 CocE/NonD family hydrolase [Brevibacillus dissolubilis] diamond 168 54.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus dissolubilis
29258010 29258010 PRJNA564810_S_NODE_4049_length_272_cov_1.811594_g4027_i0 PRJNA564810 4049 272 1.811594 4.92753568 Clostridium diolis 223919 Bacteria Bacteria 157 1.4200000000000001e-44   NR WP_179207979.1 223919 g4027 i0 80 1.98529411764706 90 18 99.3 0 2 271 76 165 WP_179207979.1 hypothetical protein [Clostridium diolis] diamond 540 157 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium diolis
29258011 29258011 PRJNA564810_S_NODE_4549_length_261_cov_3.061224_g4527_i0 PRJNA564810 4549 261 3.061224 7.98979464 Streptomyces venezuelae 54571 Bacteria Bacteria 43.9 0.0175   NR WP_224272431.1 54571 g4527 i0 34.1 0.942528735632184 82 50 94.3 1 8 253 278 355 WP_224272431.1 hypothetical protein [Streptomyces venezuelae] diamond 246 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces venezuelae
29321312 29321312 PRJNA564810_S_NODE_6989_length_223_cov_2.151899_g6967_i0 PRJNA564810 6989 223 2.151899 4.79873477 Skermania piniformis 39122 Bacteria Bacteria 72 1.15e-12   NR WP_066474287.1 39122 g6967 i0 84.6 4.7219730941704 39 6 52.5 0 3 119 344 382 WP_066474287.1 acetyl-CoA C-acetyltransferase [Skermania piniformis] diamond 1053 72 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Gordoniaceae Skermania Skermania pinensis
29794845 29794845 PRJNA564810_S_NODE_1051_length_399_cov_2.721557_g1029_i0 PRJNA564810 1051 399 2.721557 10.85901243 Chloroflexota bacterium 2026724 Bacteria Bacteria 67.8 5.48e-11   NR HZR97695.1 2026724 g1029 i0 49.4 0.609022556390977 81 30 60.2 2 357 118 103 173 HZR97695.1 carboxypeptidase regulatory-like domain-containing protein [Chloroflexota bacterium] diamond 243 67.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30174005 30174005 PRJNA564810_S_NODE_7812_length_215_cov_0.906667_g7790_i0 PRJNA564810 7812 215 0.906667 1.94933405 Clostridium sp. 1506 Bacteria Bacteria 132 8.89e-36   NR WP_367664529.1 1506 g7790 i0 88.7 1.98139534883721 71 8 99.1 0 213 1 175 245 WP_367664529.1 ABC transporter ATP-binding protein [Clostridium sp.] diamond 426 132 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp.
30332544 30332544 PRJNA564810_S_NODE_4572_length_261_cov_1.484694_g4550_i0 PRJNA564810 4572 261 1.484694 3.87505134 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 93.6 5.94e-20   NR MBN2238498.1 2026733 g4550 i0 72.4 4.03448275862069 58 16 66.7 0 14 187 586 643 MBN2238498.1 S9 family peptidase [Dehalococcoidales bacterium] diamond 1053 93.6 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
30535345 30535345 PRJNA564810_S_NODE_5553_length_244_cov_1.519553_g5531_i0 PRJNA564810 5553 244 1.519553 3.70770932 Bacilli 91061 Bacteria Bacteria 50.8 2.42e-5   NR WP_256237718.1 2806345 g5531 i0 52.4 2.95081967213115 42 20 51.6 0 2 127 126 167 WP_256237718.1 50S ribosomal protein L6 [Bacillus sp. EB600] diamond 720 50.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus sp. EB600
30584646 30584646 PRJNA564810_S_NODE_4513_length_262_cov_2.071066_g4491_i0 PRJNA564810 4513 262 2.071066 5.42619292 Mycoplasma wenyonii 65123 Bacteria Bacteria 133 1.73e-38   NR WP_112665455.1 65123 g4491 i0 100 0.790076335877863 69 0 79 0 208 2 1 69 WP_112665455.1 50S ribosomal protein L24 [Mycoplasma wenyonii] diamond 207 133 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
31041178 31041178 PRJNA564810_S_NODE_1375_length_371_cov_3.003268_g1353_i0 PRJNA564810 1375 371 3.003268 11.14212428 Bacillati 1783272 Bacteria Bacteria 48.5 2.52e-4   NR MEA2136664.1 2586742 g1353 i0 52.3 1.40700808625337 44 21 35.6 0 32 163 44 87 MEA2136664.1 hypothetical protein [Solirubrobacteraceae bacterium] diamond 522 48.5 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
31121573 31121573 PRJNA564810_S_NODE_7495_length_218_cov_1.333333_g7473_i0 PRJNA564810 7495 218 1.333333 2.90666594 Candidatus Mycoplasma haematobovis 432608 Bacteria Bacteria 99.4 1.02e-22   NR WP_187150745.1 432608 g7473 i0 68.1 0.990825688073395 72 23 99.1 0 1 216 142 213 WP_187150745.1 hypothetical protein [Candidatus Mycoplasma haematobovis] diamond 216 99.4 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Candidatus Mycoplasma haematobovis
31311543 31311543 PRJNA564810_S_NODE_8495_length_203_cov_2.463768_g8473_i0 PRJNA564810 8495 203 2.463768 5.00144904 Mycoplasma wenyonii 65123 Bacteria Bacteria 58.2 4.22e-8   NR WP_014850079.1 65123 g8473 i0 54.9 0.753694581280788 51 21 75.4 1 49 201 164 212 WP_014850079.1 hypothetical protein [Mycoplasma wenyonii] diamond 153 58.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
31659397 31659397 PRJNA564810_S_NODE_4857_length_256_cov_2.136126_g4835_i0 PRJNA564810 4857 256 2.136126 5.46848256 Mycoplasma wenyonii 65123 Bacteria Bacteria 103 5.61e-24   NR WP_112665897.1 65123 g4835 i0 59 0.97265625 83 34 97.3 0 1 249 243 325 WP_112665897.1 restriction endonuclease subunit S [Mycoplasma wenyonii] diamond 249 103 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
31785892 31785892 PRJNA564810_S_NODE_5037_length_253_cov_1.808511_g5015_i0 PRJNA564810 5037 253 1.808511 4.57553283 Chlorogloea sp. CCALA 695 2107693 Bacteria Bacteria 150 1.8799999999999994e-42   NR WP_106370624.1 2107693 g5015 i0 89.3 0.99604743083004 84 9 99.6 0 1 252 211 294 WP_106370624.1 SDR family oxidoreductase [Chlorogloea sp. CCALA 695] diamond 252 150 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Entophysalidaceae Chlorogloea Chlorogloea sp. CCALA 695
32039233 32039233 PRJNA564810_S_NODE_3958_length_274_cov_2.000000_g3936_i0 PRJNA564810 3958 274 2 5.48 Hathewaya histolytica 1498 Bacteria Bacteria 87.8 1.01e-18   NR WP_138209604.1 1498 g3936 i0 67.7 0.678832116788321 62 20 67.9 0 87 272 75 136 WP_138209604.1 Tim44 domain-containing protein [Hathewaya histolytica] diamond 186 87.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Hathewaya Hathewaya histolytica
32292690 32292690 PRJNA564810_S_NODE_7879_length_214_cov_1.469799_g7857_i0 PRJNA564810 7879 214 1.469799 3.14536986 Mycoplasma wenyonii 65123 Bacteria Bacteria 104 3.0099999999999997e-25   NR WP_112665311.1 65123 g7857 i0 96.2 0.728971962616822 52 2 72.9 0 59 214 96 147 WP_112665311.1 hypothetical protein [Mycoplasma wenyonii] diamond 156 104 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma wenyonii
32545685 32545685 PRJNA564810_S_NODE_2459_length_317_cov_1.349206_g2437_i0 PRJNA564810 2459 317 1.349206 4.27698302 Clostridium hydrogeniformans 349933 Bacteria Bacteria 188 5.83e-57   NR WP_034849062.1 349933 g2437 i0 92.4 0.993690851735016 105 8 99.4 0 315 1 214 318 WP_034849062.1 ABC transporter permease subunit [Clostridium hydrogeniformans] diamond 315 188 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium hydrogeniformans
32829024 32829024 PRJNA564810_S_NODE_2620_length_311_cov_1.516260_g2598_i0 PRJNA564810 2620 311 1.51626 4.7155686 Staphylococcus aureus 1280 Bacteria Bacteria 47 0.00249   NR WP_190346037.1 1280 g2598 i0 50 0.92604501607717 96 24 89.7 4 32 310 290 364 WP_190346037.1 hypothetical protein, partial [Staphylococcus aureus] diamond 288 47 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;