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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA564013" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 33 ✖

tax_clade 1

bioproject 1

  • PRJNA564013 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8202935 8202935 PRJNA564013_P_NODE_265187_length_249_cov_4.952128_g262335_i0 PRJNA564013 265187 249 4.952128 12.33079872 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 146 1.53e-41   NR DBA02227.1 4803 g262335 i0 84 9.75903614457831 81 13 97.6 0 5 247 142 222 DBA02227.1 TPA: hypothetical protein N0F65_007637 [Lagenidium giganteum] diamond 2430 146 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
9481552 9481552 PRJNA564013_P_NODE_94488_length_420_cov_3.286908_g91655_i0 PRJNA564013 94488 420 3.286908 13.8050136 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 2.7300000000000003e-27   NR TMW60521.1 41045 g91655 i0 67.6 10.6071428571429 74 24 52.9 0 1 222 15 88 TMW60521.1 hypothetical protein Poli38472_000563 [Pythium oligandrum] diamond 4455 110 0.990909090909091 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
12029560 12029560 PRJNA564013_P_NODE_28890_length_704_cov_3.503888_g26353_i0 PRJNA564013 28890 704 3.503888 24.66737152 root 1 Root_unresolved Root_unresolved 417 1.1499999999999999e-130   NR KAK1930851.1 4793 g26353 i0 88.2 11.6590909090909 228 27 97.2 0 686 3 1139 1366 KAK1930851.1 Eukaryotic initiation factor 4A-III [Phytophthora citrophthora] diamond 8208 421 0.990498812351544 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
12032217 12032217 PRJNA564013_P_NODE_90950_length_427_cov_4.218579_g88117_i0 PRJNA564013 90950 427 4.218579 18.01333233 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 77 1.57e-14   NR OWZ21237.1 4795 g88117 i0 78.3 4.12412177985949 46 10 32.3 0 109 246 104 149 OWZ21237.1 Ubiquitin-conjugating enzyme E2 [Phytophthora megakarya] diamond 1761 77.4 0.994832041343669 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
26604176 26604176 PRJNA564013_P_NODE_186761_length_318_cov_18.953307_g183911_i0 PRJNA564013 186761 318 18.953307 60.27151626 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 53.1 7.58e-6   NR CAH0482115.1 622444 g183911 i0 70 0.377358490566038 40 12 37.7 0 60 179 141 180 CAH0482115.1 unnamed protein product [Peronospora belbahrii] diamond 120 53.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
26649685 26649685 PRJNA564013_P_NODE_255241_length_257_cov_2.617347_g252389_i0 PRJNA564013 255241 257 2.617347 6.72658179 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 66.2 2.64e-11   NR YP_009164900.1 143453 g252389 i0 71.7 3.85214007782101 46 13 53.7 0 1 138 89 134 YP_009164900.1 ribosomal protein S13 [Pseudoperonospora cubensis] diamond 990 66.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Pseudoperonospora Pseudoperonospora cubensis
26667489 26667489 PRJNA564013_P_NODE_305081_length_222_cov_3.167702_g302229_i0 PRJNA564013 305081 222 3.167702 7.03229844 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 65.1 1.45e-10   NR CAI5737301.1 162125 g302229 i0 72.7 0.594594594594595 44 12 59.5 0 47 178 61 104 CAI5737301.1 unnamed protein product [Hyaloperonospora brassicae] diamond 132 65.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
26762664 26762664 PRJNA564013_P_NODE_110961_length_394_cov_3.687688_g108120_i0 PRJNA564013 110961 394 3.687688 14.52949072 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 136 1.56e-36   NR KAF0704289.1 112090 g108120 i0 51.1 2.08629441624365 137 60 99.7 2 394 2 40 175 KAF0704289.1 hypothetical protein AaE_015020 [Aphanomyces astaci] diamond 822 136 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
26776735 26776735 PRJNA564013_P_NODE_259221_length_254_cov_2.238342_g256369_i0 PRJNA564013 259221 254 2.238342 5.68538868 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 70.1 7.43e-12   NR KAG7400990.1 109152 g256369 i0 94.4 4.25196850393701 36 2 42.5 0 234 127 303 338 KAG7400990.1 hypothetical protein PHYBOEH_003580 [Phytophthora boehmeriae] diamond 1080 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
26921117 26921117 PRJNA564013_P_NODE_84842_length_441_cov_1.852632_g82013_i0 PRJNA564013 84842 441 1.852632 8.17010712 Peronospora tabacina 230439 SAR_Eukaryotes SAR_Eukaryotes 142 6.04e-38   NR YP_009178776.1 230439 g82013 i0 49.7 1 147 73 100 1 441 1 173 318 YP_009178776.1 orf374 [Peronospora tabacina] diamond 441 142 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora tabacina
26952542 26952542 PRJNA564013_P_NODE_34202_length_656_cov_2.796639_g31558_i0 PRJNA564013 34202 656 2.796639 18.34595184 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 58.2 6.59e-6   NR KAJ8546892.1 4785 g31558 i0 36.5 0.878048780487805 96 56 42.1 3 654 379 86 180 KAJ8546892.1 hypothetical protein ON010_g11343 [Phytophthora cinnamomi] diamond 576 58.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
26997938 26997938 PRJNA564013_P_NODE_306222_length_221_cov_7.100000_g303370_i0 PRJNA564013 306222 221 7.1 15.691 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 57.8 5.16e-8   NR KUF87346.1 4792 g303370 i0 70.3 2.55203619909502 37 11 50.2 0 119 9 80 116 KUF87346.1 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 [Phytophthora nicotianae] diamond 564 57.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
27395512 27395512 PRJNA564013_P_NODE_148443_length_353_cov_3.520548_g145594_i0 PRJNA564013 148443 353 3.520548 12.42753444 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 84 4.66e-16   NR OQR83796.1 1202772 g145594 i0 43 0.909348441926346 107 56 90.1 2 338 21 191 293 OQR83796.1 hypothetical protein ACHHYP_14294 [Achlya hypogyna] diamond 321 84 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27900294 27900294 PRJNA564013_P_NODE_132645_length_368_cov_11.752443_g129797_i0 PRJNA564013 132645 368 11.752443 43.24899024 Peronospora effusa 542832 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.00565   NR RMX64817.1 542832 g129797 i0 49.1 1.39402173913043 57 29 46.5 0 365 195 239 295 RMX64817.1 hypothetical protein DD238_004339 [Peronospora effusa] diamond 513 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
27900304 27900304 PRJNA564013_P_NODE_180825_length_324_cov_3.482890_g177975_i0 PRJNA564013 180825 324 3.48289 11.2845636 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 52.4 3e-5   NR KAG9413080.1 112091 g177975 i0 42.3 0.657407407407407 71 31 65.7 2 275 63 111 171 KAG9413080.1 hypothetical protein AC1031_016099 [Aphanomyces cochlioides] diamond 213 52.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
28058355 28058355 PRJNA564013_P_NODE_73405_length_472_cov_2.523114_g70588_i0 PRJNA564013 73405 472 2.523114 11.90909808 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 56.2 5.48e-6   NR KAG9400254.1 112091 g70588 i0 42.6 0.38771186440678 61 35 38.8 0 183 1 8 68 KAG9400254.1 hypothetical protein AC1031_011166 [Aphanomyces cochlioides] diamond 183 56.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
29005995 29005995 PRJNA564013_P_NODE_187588_length_318_cov_2.338521_g184738_i0 PRJNA564013 187588 318 2.338521 7.43649678 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 74.3 5.5e-13   NR XP_067737966.1 164328 g184738 i0 77.1 0.452830188679245 48 11 45.3 0 297 154 315 362 XP_067737966.1 uncharacterized protein KRP23_13812 [Phytophthora ramorum] diamond 144 74.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
29037386 29037386 PRJNA564013_P_NODE_193028_length_313_cov_1.000000_g190177_i0 PRJNA564013 193028 313 1 3.13 Peronospora belbahrii 622444 SAR_Eukaryotes SAR_Eukaryotes 94.7 8.37e-21   NR CAH0474068.1 622444 g190177 i0 76.7 0.575079872204473 60 14 57.5 0 274 95 245 304 CAH0474068.1 unnamed protein product [Peronospora belbahrii] diamond 180 94.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
29100403 29100403 PRJNA564013_P_NODE_214048_length_293_cov_2.637931_g211197_i0 PRJNA564013 214048 293 2.637931 7.72913783 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 96.7 1.1e-23   NR AAW67067.1 4787 g211197 i0 66.7 0.675767918088737 66 22 67.6 0 200 3 1 66 AAW67067.1 ORF99 [Phytophthora infestans] diamond 198 96.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
29195201 29195201 PRJNA564013_P_NODE_23869_length_764_cov_4.450925_g21476_i0 PRJNA564013 23869 764 4.450925 34.005067 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 114 8.42e-25   NR XP_008619252.1 1156394 g21476 i0 33.8 0.871727748691099 222 134 84.8 5 3 650 240 454 XP_008619252.1 hypothetical protein SDRG_14872 [Saprolegnia diclina VS20] diamond 666 114 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
29429604 29429604 PRJNA564013_P_NODE_58889_length_521_cov_5.491304_g56103_i0 PRJNA564013 58889 521 5.491304 28.60969384 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 102 2.72e-22   NR OQS05922.1 74557 g56103 i0 63 5.05566218809981 73 27 42 0 335 117 281 353 OQS05922.1 hypothetical protein THRCLA_01987, partial [Thraustotheca clavata] diamond 2634 103 0.990291262135922 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29587412 29587412 PRJNA564013_P_NODE_43730_length_590_cov_26.582231_g40999_i0 PRJNA564013 43730 590 26.582231 156.8351629 root 1 Root_unresolved Root_unresolved 60.5 6.48e-7   NR RHY27351.1 157072 g40999 i0 51.9 1.65254237288136 54 26 27.5 0 164 3 24 77 RHY27351.1 hypothetical protein DYB32_008073 [Aphanomyces invadans] diamond 975 60.8 0.995065789473684 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
29699817 29699817 PRJNA564013_P_NODE_221390_length_286_cov_4.360000_g218539_i0 PRJNA564013 221390 286 4.36 12.4696 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 69.7 5.72e-12   NR OQR91999.1 1202772 g218539 i0 50.7 1.44755244755245 69 33 72.4 1 6 212 162 229 OQR91999.1 hypothetical protein ACHHYP_20157 [Achlya hypogyna] diamond 414 69.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29921475 29921475 PRJNA564013_P_NODE_25191_length_747_cov_11.924198_g22756_i0 PRJNA564013 25191 747 11.924198 89.07375906 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 214 1.09e-62   NR OQS07412.1 74557 g22756 i0 51.2 0.995983935742972 248 90 98.4 9 741 7 180 399 OQS07412.1 tubulin-tyrosine ligase family [Thraustotheca clavata] diamond 744 214 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
29984489 29984489 PRJNA564013_P_NODE_181971_length_323_cov_3.347328_g179121_i0 PRJNA564013 181971 323 3.347328 10.81186944 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 89 5.79e-18   NR OQR87396.1 1202772 g179121 i0 48.4 2.60990712074303 93 48 86.4 0 18 296 705 797 OQR87396.1 hypothetical protein ACHHYP_08896 [Achlya hypogyna] diamond 843 89 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
30092833 30092833 PRJNA564013_P_NODE_149692_length_352_cov_2.439863_g146843_i0 PRJNA564013 149692 352 2.439863 8.58831776 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.16e-14   NR YP_009167034.1 114742 g146843 i0 65.5 3.28125 55 19 46.9 0 186 350 1 55 YP_009167034.1 ribosomal protein S13 [Pythium insidiosum] diamond 1155 75.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30237236 30237236 PRJNA564013_P_NODE_188032_length_317_cov_8.593750_g185182_i0 PRJNA564013 188032 317 8.59375 27.2421875 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 75.9 1.99e-13   NR KAF0742786.1 100861 g185182 i0 42.4 6.62460567823344 99 55 93.7 1 314 18 342 438 KAF0742786.1 hypothetical protein Ae201684_002329 [Aphanomyces euteiches] diamond 2100 75.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30647719 30647719 PRJNA564013_P_NODE_31353_length_680_cov_13.760905_g28766_i0 PRJNA564013 31353 680 13.760905 93.574154 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 52.4 9.76e-5   NR GMF64018.1 1490495 g28766 i0 39.2 1.55294117647059 79 45 34.4 2 441 208 53 129 GMF64018.1 unnamed protein product [Phytophthora fragariaefolia] diamond 1056 52.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
30693313 30693313 PRJNA564013_P_NODE_14613_length_936_cov_28.697143_g12634_i0 PRJNA564013 14613 936 28.697143 268.60525848 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 94.7 2.32e-17   NR KAG3030222.1 29920 g12634 i0 32.8 4.18910256410256 204 115 63.8 5 120 716 488 674 KAG3030222.1 hypothetical protein PC120_g3909 [Phytophthora cactorum] diamond 3921 95.1 0.995793901156677 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
31059053 31059053 PRJNA564013_P_NODE_291935_length_230_cov_9.899408_g289083_i0 PRJNA564013 291935 230 9.899408 22.7686384 Peronospora farinosa 134698 SAR_Eukaryotes SAR_Eukaryotes 98.6 6.97e-22   NR CAH0493595.1 134698 g289083 i0 85.5 2.15217391304348 55 8 71.7 0 226 62 686 740 CAH0493595.1 unnamed protein product [Peronospora farinosa] diamond 495 98.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora farinosa
32211196 32211196 PRJNA564013_P_NODE_87938_length_433_cov_23.510753_g85108_i0 PRJNA564013 87938 433 23.510753 101.80156049 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 99.4 5.08e-21   NR TMW66541.1 41045 g85108 i0 50 2.93071593533487 84 42 58.2 0 381 130 8 91 TMW66541.1 hypothetical protein Poli38472_004306 [Pythium oligandrum] diamond 1269 100 0.994 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32716663 32716663 PRJNA564013_P_NODE_74380_length_469_cov_3.232843_g71561_i0 PRJNA564013 74380 469 3.232843 15.16203367 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 175 2.4799999999999996e-47   NR KAG7382661.1 109152 g71561 i0 61.4 12.1855010660981 127 48 81.2 1 68 448 3 128 KAG7382661.1 hypothetical protein PHYBOEH_010395 [Phytophthora boehmeriae] diamond 5715 175 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
32779502 32779502 PRJNA564013_P_NODE_341740_length_203_cov_2.704225_g338888_i0 PRJNA564013 341740 203 2.704225 5.48957675 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 46.6 7.31e-4   NR YP_010886804.1 1440115 g338888 i0 40.6 2.60098522167488 64 37 94.6 1 3 194 110 172 YP_010886804.1 NADH dehydrogenase subunit 6 [Paralagenidium karlingii] diamond 528 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes     Paralagenidium Paralagenidium karlingii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;