RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA564013" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20258518 20258518 PRJNA564013_P_NODE_220496_length_287_cov_3.079646_g217645_i0 PRJNA564013 220496 287 3.079646 8.83858402 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 120 1.1699999999999998e-31   NR MES1916659.1 1215613 g217645 i0 72.2 0.825783972125436 79 22 82.6 0 248 12 106 184 MES1916659.1 Ras-related protein Rab-7 [Cercozoa sp. M6MM] diamond 237 120 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30805967 30805967 PRJNA564013_P_NODE_199574_length_306_cov_12.257143_g196723_i0 PRJNA564013 199574 306 12.257143 37.50685758 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 83.2 4.97e-16   NR MES1911799.1 1215613 g196723 i0 44.4 0.970588235294118 99 50 92.2 3 7 288 363 461 MES1911799.1 hypothetical protein [Cercozoa sp. M6MM] diamond 297 83.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;