contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA564013" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9478080 | 9478080 | PRJNA564013_P_NODE_240328_length_269_cov_9.182692_g237476_i0 | PRJNA564013 | 240328 | 269 | 9.182692 | 24.70144148 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 150 | 2.6399999999999998e-40 | NR | NP_066529.1 | 5762 | g237476 | i0 | 80.9 | 0.992565055762082 | 89 | 16 | 99.3 | 1 | 269 | 3 | 79 | 166 | NP_066529.1 ribosomal protein S11 [Naegleria gruberi] | diamond | 267 | 150 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 26921092 | 26921092 | PRJNA564013_P_NODE_326042_length_210_cov_3.134228_g323190_i0 | PRJNA564013 | 326042 | 210 | 3.134228 | 6.5818788 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 125 | 1.85e-35 | NR | NP_066535.1 | 5762 | g323190 | i0 | 84.1 | 0.985714285714286 | 69 | 11 | 98.6 | 0 | 207 | 1 | 27 | 95 | NP_066535.1 NADH dehydrogenase subunit 3 [Naegleria gruberi] | diamond | 207 | 125 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 28879174 | 28879174 | PRJNA564013_P_NODE_214548_length_292_cov_8.549784_g211697_i0 | PRJNA564013 | 214548 | 292 | 8.549784 | 24.96536928 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 70.1 | 1.55e-11 | NR | XP_002676703.1 | 5762 | g211697 | i0 | 36.9 | 0.863013698630137 | 84 | 53 | 86.3 | 0 | 267 | 16 | 98 | 181 | XP_002676703.1 uncharacterized protein NAEGRDRAFT_67966 [Naegleria gruberi] | diamond | 252 | 70.1 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 29398254 | 29398254 | PRJNA564013_P_NODE_88429_length_432_cov_24.245283_g85598_i0 | PRJNA564013 | 88429 | 432 | 24.245283 | 104.73962256 | Naegleria | 5761 | Heterolobosea | other_Eukaryota | 98.2 | 1.36e-20 | NR | XP_002680550.1 | 5762 | g85598 | i0 | 54.5 | 1.83333333333333 | 88 | 40 | 61.1 | 0 | 278 | 15 | 466 | 553 | XP_002680550.1 DNA dependent protein kinase catalytic subunit [Naegleria gruberi] | diamond | 792 | 98.2 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 30693314 | 30693314 | PRJNA564013_P_NODE_154813_length_347_cov_5.244755_g151964_i0 | PRJNA564013 | 154813 | 347 | 5.244755 | 18.19929985 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 49.3 | 3.17e-4 | NR | XP_044559438.1 | 5763 | g151964 | i0 | 54.5 | 1.30547550432277 | 44 | 20 | 38 | 0 | 275 | 144 | 2 | 45 | XP_044559438.1 uncharacterized protein FDP41_006199 [Naegleria fowleri] | diamond | 453 | 49.7 | 0.991951710261569 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria fowleri | ||||
| 31343245 | 31343245 | PRJNA564013_P_NODE_190276_length_315_cov_5.566929_g187425_i0 | PRJNA564013 | 190276 | 315 | 5.566929 | 17.53582635 | Acrasis kona | 1008807 | Heterolobosea | other_Eukaryota | 72.8 | 2.35e-12 | NR | KAL0480953.1 | 1008807 | g187425 | i0 | 66 | 0.476190476190476 | 50 | 17 | 47.6 | 0 | 7 | 156 | 412 | 461 | KAL0480953.1 hypothetical protein AKO1_013613 [Acrasis kona] | diamond | 150 | 72.8 | 1 | Eukaryota | Discoba | Heterolobosea | Acrasidae | Acrasis | Acrasis kona | ||||
| 31691125 | 31691125 | PRJNA564013_P_NODE_37417_length_631_cov_5.252632_g34741_i0 | PRJNA564013 | 37417 | 631 | 5.252632 | 33.14410792 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 48.1 | 0.0104 | NR | XP_002676403.1 | 5762 | g34741 | i0 | 25 | 0.741679873217116 | 156 | 92 | 73.7 | 3 | 506 | 42 | 85 | 216 | XP_002676403.1 uncharacterized protein NAEGRDRAFT_68462 [Naegleria gruberi] | diamond | 468 | 48.1 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 31704938 | 31704938 | PRJNA564013_P_NODE_41497_length_604_cov_3.427256_g38781_i0 | PRJNA564013 | 41497 | 604 | 3.427256 | 20.70062624 | Naegleria | 5761 | Heterolobosea | other_Eukaryota | 99.8 | 4.3399999999999996e-23 | NR | NP_066524.1 | 5762 | g38781 | i0 | 46.9 | 1.07781456953642 | 113 | 58 | 55.1 | 1 | 1 | 333 | 10 | 122 | NP_066524.1 ribosomal protein L14 [Naegleria gruberi] | diamond | 651 | 100 | 0.998 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 32324259 | 32324259 | PRJNA564013_P_NODE_356439_length_194_cov_2.932331_g353587_i0 | PRJNA564013 | 356439 | 194 | 2.932331 | 5.68872214 | Trypanosoma theileri | 67003 | Euglenozoa | other_Eukaryota | 43.1 | 0.0146 | NR | XP_028878919.1 | 67003 | g353587 | i0 | 44.2 | 0.664948453608247 | 43 | 24 | 66.5 | 0 | 64 | 192 | 1229 | 1271 | XP_028878919.1 SLACS reverse transcriptase, putative [Trypanosoma theileri] | diamond | 129 | 43.1 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma theileri |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;