RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA562549" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA562549 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12024913 12024913 PRJNA562549_P_NODE_36010_length_203_cov_0.915493_g35777_i0 PRJNA562549 36010 203 0.915493 1.85845079 Chloroflexota bacterium 2026724 Bacteria Bacteria 120 9.26e-30   NR MEM7112781.1 2026724 g35777 i0 76.1 5.94088669950739 67 16 99 0 1 201 391 457 MEM7112781.1 NADP-dependent isocitrate dehydrogenase [Chloroflexota bacterium] diamond 1206 120 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27458537 27458537 PRJNA562549_P_NODE_20823_length_255_cov_2.505155_g20590_i0 PRJNA562549 20823 255 2.505155 6.38814525 Anaerolineae bacterium 2052143 Bacteria Bacteria 45.1 0.00661   NR MCB0164638.1 2052143 g20590 i0 34.3 0.823529411764706 70 45 82.4 1 221 12 276 344 MCB0164638.1 protein kinase [Anaerolineae bacterium] diamond 210 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;