contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA562549" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1821468 | 1821468 | PRJNA562549_P_NODE_32662_length_209_cov_0.878378_g32429_i0 | PRJNA562549 | 32662 | 209 | 0.878378 | 1.83581002 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 117 | 1.7000000000000003e-28 | NR | MBS1889877.1 | 2900548 | g32429 | i0 | 76.8 | 0.990430622009569 | 69 | 16 | 99 | 0 | 208 | 2 | 240 | 308 | MBS1889877.1 hypothetical protein [Actinomycetota bacterium] | diamond | 207 | 117 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 22222851 | 22222851 | PRJNA562549_P_NODE_32638_length_209_cov_0.878378_g32405_i0 | PRJNA562549 | 32638 | 209 | 0.878378 | 1.83581002 | Bacteria | 2 | Bacteria | Bacteria | 106 | 1.18e-25 | NR | WP_123304045.1 | 56055 | g32405 | i0 | 69.6 | 3.96172248803828 | 69 | 21 | 99 | 0 | 209 | 3 | 133 | 201 | WP_123304045.1 malate dehydrogenase [Bogoriella caseilytica] | diamond | 828 | 106 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Bogoriellaceae | Bogoriella | Bogoriella caseilytica | ||
| 27079158 | 27079158 | PRJNA562549_P_NODE_31122_length_212_cov_0.993377_g30889_i0 | PRJNA562549 | 31122 | 212 | 0.993377 | 2.10595924 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 44.7 | 0.00514 | NR | MDQ1548034.1 | 2900548 | g30889 | i0 | 43.1 | 1.42924528301887 | 51 | 28 | 72.2 | 1 | 50 | 202 | 23 | 72 | MDQ1548034.1 hypothetical protein [Actinomycetota bacterium] | diamond | 303 | 44.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 27110564 | 27110564 | PRJNA562549_P_NODE_24222_length_238_cov_1.819209_g23989_i0 | PRJNA562549 | 24222 | 238 | 1.819209 | 4.32971742 | Luedemannella flava | 349316 | Bacteria | Bacteria | 43.9 | 0.00426 | NR | MFC7480816.1 | 349316 | g23989 | i0 | 34.7 | 1.81512605042017 | 72 | 39 | 90.8 | 2 | 237 | 22 | 28 | 91 | MFC7480816.1 hypothetical protein [Luedemannella flava] | diamond | 432 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Luedemannella | Luedemannella flava | ||
| 28310980 | 28310980 | PRJNA562549_P_NODE_33886_length_207_cov_0.890411_g33653_i0 | PRJNA562549 | 33886 | 207 | 0.890411 | 1.84315077 | Propioniciclava sp. | 2038686 | Bacteria | Bacteria | 68.9 | 1.37e-11 | NR | WP_415103230.1 | 2038686 | g33653 | i0 | 58.5 | 0.942028985507246 | 65 | 24 | 94.2 | 2 | 1 | 195 | 491 | 552 | WP_415103230.1 S-layer homology domain-containing protein [Propioniciclava sp.] | diamond | 195 | 68.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Propioniciclava | Propioniciclava sp. | ||
| 29068785 | 29068785 | PRJNA562549_P_NODE_12588_length_323_cov_2.347328_g12355_i0 | PRJNA562549 | 12588 | 323 | 2.347328 | 7.58186944 | Amycolatopsis sp. lyj-23 | 2789283 | Bacteria | Bacteria | 45.1 | 0.0134 | NR | WP_410591092.1 | 2789283 | g12355 | i0 | 38.3 | 0.891640866873065 | 47 | 29 | 43.7 | 0 | 250 | 110 | 81 | 127 | WP_410591092.1 hypothetical protein [Amycolatopsis sp. lyj-23] | diamond | 288 | 45.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis sp. lyj-23 | ||
| 29226782 | 29226782 | PRJNA562549_P_NODE_35929_length_203_cov_0.915493_g35696_i0 | PRJNA562549 | 35929 | 203 | 0.915493 | 1.85845079 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 115 | 7.419999999999999e-31 | NR | MBS1889790.1 | 2900548 | g35696 | i0 | 83.1 | 0.960591133004926 | 65 | 11 | 96.1 | 0 | 203 | 9 | 97 | 161 | MBS1889790.1 MC/SLC25 family protein [Actinomycetota bacterium] | diamond | 195 | 115 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 29763142 | 29763142 | PRJNA562549_P_NODE_34551_length_205_cov_2.277778_g34318_i0 | PRJNA562549 | 34551 | 205 | 2.277778 | 4.6694449 | Streptosporangium roseum | 2001 | Bacteria | Bacteria | 42 | 0.0297 | NR | WP_352036708.1 | 2001 | g34318 | i0 | 48.4 | 0.453658536585366 | 31 | 16 | 45.4 | 0 | 188 | 96 | 114 | 144 | WP_352036708.1 hypothetical protein [Streptosporangium roseum] | diamond | 93 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Streptosporangium | Streptosporangium roseum | ||
| 31090161 | 31090161 | PRJNA562549_P_NODE_15455_length_293_cov_1.607759_g15222_i0 | PRJNA562549 | 15455 | 293 | 1.607759 | 4.71073387 | Leucobacter sp. PH1c | 1397278 | Bacteria | Bacteria | 62.8 | 6.16e-9 | NR | WP_025134996.1 | 1397278 | g15222 | i0 | 39 | 0.839590443686007 | 82 | 47 | 80.9 | 2 | 260 | 24 | 400 | 481 | WP_025134996.1 hypothetical protein [Leucobacter sp. PH1c] | diamond | 246 | 62.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leucobacter | Leucobacter sp. PH1c | ||
| 31501464 | 31501464 | PRJNA562549_P_NODE_33816_length_207_cov_0.890411_g33583_i0 | PRJNA562549 | 33816 | 207 | 0.890411 | 1.84315077 | Ilumatobacteraceae bacterium | 2497619 | Bacteria | Bacteria | 128 | 1.18e-33 | NR | MBJ7460789.1 | 2497619 | g33583 | i0 | 98.5 | 0.985507246376812 | 68 | 1 | 98.6 | 0 | 3 | 206 | 209 | 276 | MBJ7460789.1 ABC transporter substrate-binding protein [Ilumatobacteraceae bacterium] | diamond | 204 | 128 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacteraceae bacterium | |||
| 32387078 | 32387078 | PRJNA562549_P_NODE_32119_length_210_cov_0.872483_g31886_i0 | PRJNA562549 | 32119 | 210 | 0.872483 | 1.8322143 | Cutibacterium granulosum | 33011 | Bacteria | Bacteria | 118 | 1.38e-32 | NR | PZP18157.1 | 33011 | g31886 | i0 | 98.2 | 0.814285714285714 | 57 | 1 | 81.4 | 0 | 39 | 209 | 1 | 57 | PZP18157.1 MAG: hypothetical protein DI600_09895 [Cutibacterium granulosum] | diamond | 171 | 118 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium granulosum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;