RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA561212" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11333841 11333841 PRJNA561212_P_NODE_3589_length_583_cov_2.639216_g3382_i0 PRJNA561212 3589 583 2.639216 15.38662928 Paulinella 39716 SAR_Eukaryotes SAR_Eukaryotes 276 1.11e-91   NR MES1912196.1 1215613 g3382 i0 72.6 74.9691252144082 179 49 92.1 0 32 568 1 179 MES1912196.1 Rho GTPase protein rac1 [Cercozoa sp. M6MM] diamond 43707 278 0.992805755395683 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
12024627 12024627 PRJNA561212_P_NODE_7490_length_401_cov_1.618902_g7279_i0 PRJNA561212 7490 401 1.618902 6.49179702 root 1 Root_unresolved Root_unresolved 223 9.71e-72   NR AAT09096.1 227086 g7279 i0 82.9 8.72319201995012 129 22 96.5 0 389 3 25 153 AAT09096.1 cyclophilin [Bigelowiella natans] diamond 3498 225 0.991111111111111 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
28184280 28184280 PRJNA561212_P_NODE_25846_length_242_cov_0.923077_g25635_i0 PRJNA561212 25846 242 0.923077 2.23384634 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.5e-8   NR MES1914853.1 1215613 g25635 i0 52 0.619834710743802 50 23 62 1 16 165 309 357 MES1914853.1 hypothetical protein [Cercozoa sp. M6MM] diamond 150 60.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;