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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA561212" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5649302 5649302 PRJNA561212_P_NODE_3685_length_576_cov_2.658052_g3478_i0 PRJNA561212 3685 576 2.658052 15.31037952 Pseudogracilibacillus sp. 1968904 Bacteria Bacteria 194 1e-56   NR HLS23378.1 1968904 g3478 i0 58.8 10.671875 170 64 88.5 4 517 8 6 169 HLS23378.1 acyl-CoA dehydrogenase [Pseudogracilibacillus sp.] diamond 6147 194 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Pseudogracilibacillus Pseudogracilibacillus sp.
5649321 5649321 PRJNA561212_P_NODE_4745_length_509_cov_1.474771_g4536_i0 PRJNA561212 4745 509 1.474771 7.50658439 Bacillati 1783272 Bacteria Bacteria 180 1.3e-52   NR WP_257348982.1 163879 g4536 i0 52.7 38.139489194499 150 55 88.4 2 495 46 127 260 WP_257348982.1 formylglycine-generating enzyme family protein [Pseudalkalibacillus decolorationis] diamond 19413 180 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Fictibacillaceae Pseudalkalibacillus Pseudalkalibacillus decolorationis
18397297 18397297 PRJNA561212_P_NODE_21175_length_251_cov_0.882022_g20964_i0 PRJNA561212 21175 251 0.882022 2.21387522 Halanaerobiales bacterium 2094029 Bacteria Bacteria 119 3.4800000000000003e-29   NR MBS3812162.1 2094029 g20964 i0 86.4 0.788844621513944 66 9 78.9 0 44 241 150 215 MBS3812162.1 hypothetical protein [Halanaerobiales bacterium] diamond 198 119 1 Bacteria   Bacillati Bacillota Clostridia Halanaerobiales     Halanaerobiales bacterium
23497698 23497698 PRJNA561212_P_NODE_16959_length_275_cov_1.806931_g16748_i0 PRJNA561212 16959 275 1.806931 4.96906025 Clostridium fallax 1533 Bacteria Bacteria 76.3 1.82e-15   NR WP_111944842.1 1533 g16748 i0 63.3 0.534545454545455 49 18 53.5 0 127 273 52 100 WP_111944842.1 CoA-binding protein [Clostridium fallax] diamond 147 76.3 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium fallax
24771495 24771495 PRJNA561212_P_NODE_10460_length_342_cov_0.802974_g10249_i0 PRJNA561212 10460 342 0.802974 2.74617108 Paenibacillus 44249 Bacteria Bacteria 88.2 1.41e-17   NR WP_036667073.1 1449062 g10249 i0 41.4 8.06140350877193 116 57 97.4 4 2 334 223 332 WP_036667073.1 S8 family serine peptidase [Paenibacillus sp. UNC217MF] diamond 2757 88.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. UNC217MF
26840147 26840147 PRJNA561212_P_NODE_16101_length_282_cov_0.832536_g15890_i0 PRJNA561212 16101 282 0.832536 2.34775152 Bacteria 2 Bacteria Bacteria 118 1.45e-28   NR MCI9021244.1 142586 g15890 i0 57.6 7.76595744680851 92 39 97.9 0 280 5 38 129 MCI9021244.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Eubacterium sp.] diamond 2190 119 0.991596638655462 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium Eubacterium sp.
26952377 26952377 PRJNA561212_P_NODE_382_length_1565_cov_2.332440_g305_i0 PRJNA561212 382 1565 2.33244 36.502686 Clostridium cavendishii 349931 Bacteria Bacteria 49.7 0.0232   NR WP_159433218.1 349931 g305 i0 33.1 0.576996805111821 148 68 26.1 6 1188 781 165 293 WP_159433218.1 patatin-like phospholipase family protein [Clostridium cavendishii] diamond 903 49.7 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium cavendishii
27395384 27395384 PRJNA561212_P_NODE_583_length_1331_cov_4.757552_g478_i0 PRJNA561212 583 1331 4.757552 63.32301712 Lysinibacillus sphaericus 1421 Bacteria Bacteria 66.6 2.54e-8   NR WP_197140054.1 1421 g478 i0 52.5 0.340345604808415 59 28 13.3 0 668 492 184 242 WP_197140054.1 AP2 domain-containing protein [Lysinibacillus sphaericus] diamond 453 66.6 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Lysinibacillus Lysinibacillus sphaericus
27472334 27472334 PRJNA561212_P_NODE_21963_length_250_cov_0.881356_g21752_i0 PRJNA561212 21963 250 0.881356 2.20339 Bacillati 1783272 Bacteria Bacteria 44.3 0.00504   NR MCI8692924.1 1898203 g21752 i0 41.3 4.188 46 27 55.2 0 80 217 81 126 MCI8692924.1 zinc ribbon domain-containing protein [Lachnospiraceae bacterium] diamond 1047 44.3 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
27472337 27472337 PRJNA561212_P_NODE_5863_length_456_cov_1.720627_g5652_i0 PRJNA561212 5863 456 1.720627 7.84605912 Candidatus Avimonas 2720801 Bacteria Bacteria 89.4 2.11e-17   NR HHV51481.1 1898207 g5652 i0 38.1 2.65789473684211 134 69 88.2 3 415 14 432 551 HHV51481.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridiales bacterium] diamond 1212 89.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
27616303 27616303 PRJNA561212_P_NODE_3504_length_590_cov_1.050290_g3298_i0 PRJNA561212 3504 590 1.05029 6.196711 Eubacterium nodatum ATCC 33 35518 Bacteria Bacteria 127 4.35e-34   NR ETK00367.1 1161902 g3298 i0 52.7 1.99830508474576 131 52 65.6 3 501 115 2 124 ETK00367.1 reactive intermediate/imine deaminase [Eubacterium nodatum ATCC 33099] diamond 1179 127 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae   [Eubacterium] nodatum
27900159 27900159 PRJNA561212_P_NODE_22085_length_249_cov_1.607955_g21874_i0 PRJNA561212 22085 249 1.607955 4.00380795 Psychrobacillus sp. FSL K6-2843 2921549 Bacteria Bacteria 46.2 0.00244   NR WP_151109276.1 2921549 g21874 i0 31.9 0.867469879518072 72 46 86.7 1 231 16 284 352 WP_151109276.1 metallophosphoesterase family protein [Psychrobacillus sp. FSL K6-2843] diamond 216 46.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Psychrobacillus Psychrobacillus sp. FSL K6-2843
28595116 28595116 PRJNA561212_P_NODE_10247_length_345_cov_0.966912_g10036_i0 PRJNA561212 10247 345 0.966912 3.3358464 Lacrimispora sp. 2719234 Bacteria Bacteria 47.4 0.00261   NR WP_312448477.1 2719234 g10036 i0 59 0.339130434782609 39 15 33.9 1 104 220 89 126 WP_312448477.1 hypothetical protein [Lacrimispora sp.] diamond 117 47.4 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora sp.
28847414 28847414 PRJNA561212_P_NODE_2688_length_670_cov_2.765494_g2483_i0 PRJNA561212 2688 670 2.765494 18.5288098 Clostridia bacterium 2044939 Bacteria Bacteria 135 2.48e-32   NR MDD4110734.1 2044939 g2483 i0 37.5 3.24179104477612 240 116 98.5 4 668 9 88 313 MDD4110734.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Clostridia bacterium] diamond 2172 135 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29131910 29131910 PRJNA561212_P_NODE_22869_length_248_cov_0.891429_g22658_i0 PRJNA561212 22869 248 0.891429 2.21074392 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 85.5 8.32e-18   NR MCH5185881.1 2485925 g22658 i0 53.2 1.83870967741935 79 32 95.6 1 244 8 174 247 MCH5185881.1 peptide chain release factor N(5)-glutamine methyltransferase [Oscillospiraceae bacterium] diamond 456 85.5 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
29384418 29384418 PRJNA561212_P_NODE_21609_length_250_cov_1.463277_g21398_i0 PRJNA561212 21609 250 1.463277 3.6581925 Bacilli bacterium 1903720 Bacteria Bacteria 140 1.34e-37   NR MBE3102865.1 1903720 g21398 i0 87 0.924 77 10 92.4 0 231 1 68 144 MBE3102865.1 hypothetical protein [Bacilli bacterium] diamond 231 140 1 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
29952710 29952710 PRJNA561212_P_NODE_9671_length_354_cov_1.701068_g9460_i0 PRJNA561212 9671 354 1.701068 6.02178072 Clostridia bacterium 2044939 Bacteria Bacteria 64.7 1.23e-9   NR MDO5112239.1 2044939 g9460 i0 47 0.703389830508475 83 37 70.3 2 278 30 2 77 MDO5112239.1 ParA family protein [Clostridia bacterium] diamond 249 64.7 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
30282976 30282976 PRJNA561212_P_NODE_21372_length_251_cov_0.876404_g21161_i0 PRJNA561212 21372 251 0.876404 2.19977404 Paraclostridium 1849822 Bacteria Bacteria 100 3.55e-24   NR WP_373598596.1 1490 g21161 i0 56.4 1.87649402390438 78 34 93.2 0 246 13 6 83 WP_373598596.1 hypothetical protein [Paraclostridium bifermentans] diamond 471 100 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Paraclostridium Paraclostridium bifermentans
30332362 30332362 PRJNA561212_P_NODE_25012_length_244_cov_0.912281_g24801_i0 PRJNA561212 25012 244 0.912281 2.22596564 Eubacteriales bacterium 2831996 Bacteria Bacteria 66.2 8.32e-11   NR MDD4564165.1 2831996 g24801 i0 50 1.86885245901639 78 38 95.9 1 242 9 28 104 MDD4564165.1 CatB-related O-acetyltransferase [Eubacteriales bacterium] diamond 456 66.2 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Eubacteriales bacterium
30395452 30395452 PRJNA561212_P_NODE_13533_length_304_cov_1.060606_g13322_i0 PRJNA561212 13533 304 1.060606 3.22424224 Symbiobacteriaceae bacterium 2602712 Bacteria Bacteria 50.4 1.55e-4   NR MCL2497126.1 2602712 g13322 i0 50.8 1.16447368421053 59 25 58.2 2 17 193 337 391 MCL2497126.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Symbiobacteriaceae bacterium] diamond 354 50.4 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Symbiobacteriaceae   Symbiobacteriaceae bacterium
30566646 30566646 PRJNA561212_P_NODE_1213_length_978_cov_1.567956_g1050_i0 PRJNA561212 1213 978 1.567956 15.33460968 PVC group 1783257 Bacteria Bacteria 64.7 2e-8   NR WP_251525362.1 152268 g1050 i0 57.4 0.723926380368098 54 23 16.6 0 284 123 121 174 WP_251525362.1 AP2 domain-containing protein [Metabacillus litoralis] diamond 708 64.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Metabacillus Metabacillus litoralis
30805819 30805819 PRJNA561212_P_NODE_17114_length_274_cov_1.467662_g16903_i0 PRJNA561212 17114 274 1.467662 4.02139388 Bacillota bacterium 1879010 Bacteria Bacteria 133 3.0599999999999997e-35   NR MEW6274786.1 1879010 g16903 i0 68.6 3.73357664233577 86 27 94.2 0 265 8 183 268 MEW6274786.1 aminotransferase class V-fold PLP-dependent enzyme [Bacillota bacterium] diamond 1023 133 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30837380 30837380 PRJNA561212_P_NODE_18354_length_265_cov_1.494792_g18143_i0 PRJNA561212 18354 265 1.494792 3.9611988 Phascolarctobacterium sp. 2049039 Bacteria Bacteria 78.6 6.72e-15   NR MBO5168642.1 2049039 g18143 i0 60 0.566037735849057 50 20 56.6 0 6 155 284 333 MBO5168642.1 UDP-glucose 4-epimerase GalE [Phascolarctobacterium sp.] diamond 150 78.6 1 Bacteria   Bacillati Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium sp.
30837382 30837382 PRJNA561212_P_NODE_20114_length_253_cov_1.261111_g19903_i0 PRJNA561212 20114 253 1.261111 3.19061083 Paenibacillus lacisoli 3064525 Bacteria Bacteria 54.3 3.29e-6   NR WP_305023095.1 3064525 g19903 i0 37.2 2.71541501976285 78 46 88.9 1 233 9 1 78 WP_305023095.1 phosphotransferase enzyme family protein [Paenibacillus lacisoli] diamond 687 54.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus lacisoli
31166958 31166958 PRJNA561212_P_NODE_23715_length_246_cov_0.901734_g23504_i0 PRJNA561212 23715 246 0.901734 2.21826564 Paenibacillus 44249 Bacteria Bacteria 52.8 5.43e-6   NR WP_090789476.1 1882751 g23504 i0 41.8 5.14634146341463 67 29 81.7 1 10 210 10 66 WP_090789476.1 histidine phosphatase family protein [Paenibacillus sp. GP183] diamond 1266 53.1 0.994350282485876 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. GP183
31469761 31469761 PRJNA561212_P_NODE_8436_length_378_cov_1.360656_g8225_i0 PRJNA561212 8436 378 1.360656 5.14327968 Lysinibacillus sphaericus 1421 Bacteria Bacteria 63.5 4.15e-9   NR WP_197140054.1 1421 g8225 i0 51.8 1.9047619047619 56 27 44.4 0 209 376 184 239 WP_197140054.1 AP2 domain-containing protein [Lysinibacillus sphaericus] diamond 720 63.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Lysinibacillus Lysinibacillus sphaericus
31578461 31578461 PRJNA561212_P_NODE_11896_length_322_cov_0.855422_g11685_i0 PRJNA561212 11896 322 0.855422 2.75445884 Bacteria 2 Bacteria Bacteria 92 1.16e-19   NR NCC48463.1 2044939 g11685 i0 55.2 3.37267080745342 96 34 81.1 3 271 11 1 96 NCC48463.1 peptide-methionine (S)-S-oxide reductase [Clostridia bacterium] diamond 1086 92 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
31722508 31722508 PRJNA561212_P_NODE_18737_length_263_cov_0.973684_g18526_i0 PRJNA561212 18737 263 0.973684 2.56078892 Oscillospiraceae bacterium 2485925 Bacteria Bacteria 43.1 0.035   NR MBR4473760.1 2485925 g18526 i0 42.9 0.638783269961977 56 30 63.9 1 28 195 130 183 MBR4473760.1 hypothetical protein [Oscillospiraceae bacterium] diamond 168 43.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Oscillospiraceae   Oscillospiraceae bacterium
32891543 32891543 PRJNA561212_P_NODE_23500_length_247_cov_0.896552_g23289_i0 PRJNA561212 23500 247 0.896552 2.21448344 Bacillota bacterium 1879010 Bacteria Bacteria 84 1.16e-16   NR NMB01881.1 1879010 g23289 i0 54.7 5.45344129554656 75 31 91.1 1 12 236 3 74 NMB01881.1 2Fe-2S iron-sulfur cluster binding domain-containing protein [Bacillota bacterium] diamond 1347 84 1 Bacteria   Bacillati Bacillota         Bacillota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;