RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA561212" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 3 ✖

bioproject 1

  • PRJNA561212 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27850998 27850998 PRJNA561212_P_NODE_21184_length_251_cov_0.876404_g20973_i0 PRJNA561212 21184 251 0.876404 2.19977404 root 1 Root_unresolved Root_unresolved 55.1 1.44e-6   NR MCG3215690.1 2026747 g20973 i0 52.9 1.24302788844622 51 21 61 1 225 73 144 191 MCG3215690.1 SDR family oxidoreductase [Candidatus Heimdallarchaeota archaeon] diamond 312 55.5 0.992792792792793 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
29146002 29146002 PRJNA561212_P_NODE_20249_length_253_cov_0.866667_g20038_i0 PRJNA561212 20249 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 61.6 2.69e-9   NR MBN1801351.1 2053489 g20038 i0 38 3.77075098814229 92 44 94.9 4 240 1 57 147 MBN1801351.1 DUF4537 domain-containing protein [Promethearchaeota archaeon] diamond 954 61.6 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30679204 30679204 PRJNA561212_P_NODE_14413_length_295_cov_1.117117_g14202_i0 PRJNA561212 14413 295 1.117117 3.29549515 Candidatus Heimdallarchaeota archaeon LC_2 1841597 Archaea Archaea 65.9 4.75e-10   NR OLS23386.1 1841597 g14202 i0 59.3 2.70508474576271 54 21 54.9 1 176 15 290 342 OLS23386.1 MAG: ATP-dependent RNA helicase RhlE [Candidatus Heimdallarchaeota archaeon LC_2] diamond 798 65.9 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;