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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA561212" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 10 ✖

bioproject 1

  • PRJNA561212 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4372903 4372903 PRJNA561212_P_NODE_25584_length_243_cov_0.888235_g25373_i0 PRJNA561212 25584 243 0.888235 2.15841105 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 149 1.02e-41   NR WP_047393841.1 1339239 g25373 i0 97.2 0.876543209876543 71 2 87.7 0 223 11 168 238 WP_047393841.1 tRNA 2-thiouridine(34) synthase MnmA [Cetobacterium sp. ZOR0034] diamond 213 149 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
6923324 6923324 PRJNA561212_P_NODE_14746_length_292_cov_1.342466_g14535_i0 PRJNA561212 14746 292 1.342466 3.92000072 Cetobacterium sp. NK 2071632 Bacteria Bacteria 150 1.96e-41   NR WP_256689778.1 2993530 g14535 i0 90.3 0.955479452054795 93 9 95.5 0 283 5 90 182 WP_256689778.1 RNA polymerase sigma factor RpoD [Cetobacterium sp. NK01] diamond 279 150 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. NK01
27205277 27205277 PRJNA561212_P_NODE_23922_length_246_cov_0.901734_g23711_i0 PRJNA561212 23922 246 0.901734 2.21826564 unclassified Cetobacterium 2630983 Bacteria Bacteria 142 3.77e-39   NR WP_047382454.1 2630983 g23711 i0 93.6 0.951219512195122 78 5 95.1 0 241 8 153 230 WP_047382454.1 MULTISPECIES: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [unclassified Cetobacterium] diamond 234 142 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27426934 27426934 PRJNA561212_P_NODE_19563_length_257_cov_1.157609_g19352_i0 PRJNA561212 19563 257 1.157609 2.97505513 Cetobacterium sp. 2071632 Bacteria Bacteria 142 4.9399999999999986e-40   NR WP_291944696.1 2071632 g19352 i0 85.4 1.91439688715953 82 12 95.7 0 251 6 83 164 WP_291944696.1 hypothetical protein [Cetobacterium sp.] diamond 492 142 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
28531988 28531988 PRJNA561212_P_NODE_24807_length_244_cov_0.912281_g24596_i0 PRJNA561212 24807 244 0.912281 2.22596564 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 157 1.49e-45   NR WP_294094021.1 527638 g24596 i0 97.4 0.959016393442623 78 2 95.9 0 9 242 3 80 WP_294094021.1 DUF2156 domain-containing protein [uncultured Cetobacterium sp.] diamond 234 157 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
29731368 29731368 PRJNA561212_P_NODE_10570_length_340_cov_1.149813_g10359_i0 PRJNA561212 10570 340 1.149813 3.9093642 unclassified Cetobacterium 2630983 Bacteria Bacteria 204 1.36e-65   NR WP_047383851.1 2630983 g10359 i0 99.1 0.935294117647059 106 1 93.5 0 329 12 12 117 WP_047383851.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 318 204 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30237094 30237094 PRJNA561212_P_NODE_24932_length_244_cov_0.912281_g24721_i0 PRJNA561212 24932 244 0.912281 2.22596564 Cetobacterium 180162 Bacteria Bacteria 64.3 1.84e-11   NR WP_023050073.1 180162 g24721 i0 100 0.823770491803279 33 0 40.6 0 134 232 1 33 WP_023050073.1 MULTISPECIES: FeoA family protein [Cetobacterium] diamond 201 64.3 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30900707 30900707 PRJNA561212_P_NODE_22814_length_248_cov_0.891429_g22603_i0 PRJNA561212 22814 248 0.891429 2.21074392 Cetobacterium sp. NK 2071632 Bacteria Bacteria 136 6.49e-40   NR WP_256690191.1 2993530 g22603 i0 93.2 0.883064516129032 73 5 88.3 0 22 240 1 73 WP_256690191.1 HPr family phosphocarrier protein [Cetobacterium sp. NK01] diamond 219 136 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. NK01
31690921 31690921 PRJNA561212_P_NODE_13917_length_300_cov_0.991189_g13706_i0 PRJNA561212 13917 300 0.991189 2.973567 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 186 4.789999999999999e-54   NR WP_047393897.1 1339239 g13706 i0 97.9 0.95 95 2 95 0 294 10 287 381 WP_047393897.1 S1 RNA-binding domain-containing protein [Cetobacterium sp. ZOR0034] diamond 285 186 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
32576995 32576995 PRJNA561212_P_NODE_7059_length_414_cov_1.266862_g6848_i0 PRJNA561212 7059 414 1.266862 5.24480868 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 261 6.580000000000001e-85   NR WP_294096157.1 527638 g6848 i0 94.8 0.978260869565217 135 7 97.8 0 405 1 118 252 WP_294096157.1 hypothetical protein [uncultured Cetobacterium sp.] diamond 405 261 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;