RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA561212" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA561212 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26635836 26635836 PRJNA561212_P_NODE_10901_length_335_cov_1.774809_g10690_i0 PRJNA561212 10901 335 1.774809 5.94561015 Marseillevirus LCMAC1 2506603 Viruses Viruses 153 3.5e-45   NR QBK86635.1 2506603 g10690 i0 70 2.63283582089552 100 30 89.6 0 301 2 1 100 QBK86635.1 MAG: cytidylyltransferase-like protein [Marseillevirus LCMAC102] diamond 882 153 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC102
26794309 26794309 PRJNA561212_P_NODE_10081_length_347_cov_3.127737_g9870_i0 PRJNA561212 10081 347 3.127737 10.85324739 Marseillevirus LCMAC1 2506602 Viruses Viruses 154 3.789999999999999e-42   NR QBK85775.1 2506602 g9870 i0 66.7 0.855907780979827 99 33 85.6 0 2 298 391 489 QBK85775.1 MAG: aspartyl/asparaginyl-tRNA synthetase [Marseillevirus LCMAC101] diamond 297 154 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC101
32716635 32716635 PRJNA561212_P_NODE_2700_length_669_cov_0.998322_g2495_i0 PRJNA561212 2700 669 0.998322 6.67877418 Coccolithovirus 346673 Viruses Viruses 108 2e-23   NR YP_293932.1 181082 g2495 i0 36.5 1.42600896860987 159 94 71.3 2 55 531 321 472 YP_293932.1 Major Facilitator Superfamily protein [Emiliania huxleyi virus 86] diamond 954 108 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Coccolithovirus Coccolithovirus huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;