contig_metadata
14 rows where analysis = "diamond", bioproject = "PRJNA561138" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27742767 | 27742767 | PRJNA561138_P_NODE_10204_length_401_cov_1.185976_g10009_i0 | PRJNA561138 | 10204 | 401 | 1.185976 | 4.75576376 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 143 | 4.559999999999999e-40 | NR | HET9740137.1 | 2586742 | g10009 | i0 | 53.4 | 4.90773067331671 | 131 | 60 | 98 | 1 | 4 | 396 | 8 | 137 | HET9740137.1 polysaccharide deacetylase family protein [Solirubrobacteraceae bacterium] | diamond | 1968 | 143 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 27805790 | 27805790 | PRJNA561138_P_NODE_11844_length_377_cov_1.266447_g11649_i0 | PRJNA561138 | 11844 | 377 | 1.266447 | 4.77450519 | Nocardioides coralli | 2872154 | Bacteria | Bacteria | 80.1 | 9.770000000000001e-16 | NR | WP_222896540.1 | 2872154 | g11649 | i0 | 47.1 | 0.946949602122016 | 119 | 57 | 91.5 | 4 | 14 | 358 | 62 | 178 | WP_222896540.1 hypothetical protein [Nocardioides coralli] | diamond | 357 | 80.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides coralli | ||
| 28689915 | 28689915 | PRJNA561138_P_NODE_19347_length_295_cov_1.040541_g19152_i0 | PRJNA561138 | 19347 | 295 | 1.040541 | 3.06959595 | Mycobacteriales bacterium | 1957017 | Bacteria | Bacteria | 42.7 | 0.0347 | NR | HTW18877.1 | 1957017 | g19152 | i0 | 36.4 | 0.783050847457627 | 77 | 47 | 76.3 | 1 | 236 | 12 | 2 | 78 | HTW18877.1 GNAT family N-acetyltransferase [Mycobacteriales bacterium] | diamond | 231 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriales bacterium | ||||
| 28892900 | 28892900 | PRJNA561138_P_NODE_17888_length_309_cov_0.978814_g17693_i0 | PRJNA561138 | 17888 | 309 | 0.978814 | 3.02453526 | Bacteria | 2 | Bacteria | Bacteria | 166 | 8.559999999999999e-48 | NR | MCT6839135.1 | 2478472 | g17693 | i0 | 100 | 2.44660194174757 | 84 | 0 | 81.6 | 0 | 57 | 308 | 284 | 367 | MCT6839135.1 CHASE3 domain-containing protein [Bifidobacteriales bacterium] | diamond | 756 | 166 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriales bacterium | ||||
| 28942526 | 28942526 | PRJNA561138_P_NODE_10088_length_403_cov_0.933333_g9893_i0 | PRJNA561138 | 10088 | 403 | 0.933333 | 3.76133199 | Candidatus Solirubrobacter pratensis | 1298857 | Bacteria | Bacteria | 47 | 0.0067 | NR | WP_028057745.1 | 1298857 | g9893 | i0 | 39.8 | 1.94292803970223 | 83 | 48 | 60.3 | 2 | 14 | 256 | 74 | 156 | WP_028057745.1 FG-GAP repeat domain-containing protein [Candidatus Solirubrobacter pratensis] | diamond | 783 | 47 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacter | Candidatus Solirubrobacter pratensis | ||
| 30710960 | 30710960 | PRJNA561138_P_NODE_24594_length_251_cov_0.865169_g24399_i0 | PRJNA561138 | 24594 | 251 | 0.865169 | 2.17157419 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 42.7 | 0.00529 | NR | MEA2510206.1 | 2900548 | g24399 | i0 | 57.1 | 0.418326693227092 | 35 | 13 | 40.6 | 2 | 117 | 218 | 17 | 50 | MEA2510206.1 hypothetical protein [Actinomycetota bacterium] | diamond | 105 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 30774334 | 30774334 | PRJNA561138_P_NODE_17874_length_309_cov_1.072034_g17679_i0 | PRJNA561138 | 17874 | 309 | 1.072034 | 3.31258506 | Kutzneria sp. 744 | 345341 | Bacteria | Bacteria | 52 | 4.47e-5 | NR | WP_052395479.1 | 345341 | g17679 | i0 | 44.3 | 0.766990291262136 | 79 | 38 | 72.8 | 3 | 298 | 74 | 553 | 629 | WP_052395479.1 MFS transporter [Kutzneria sp. 744] | diamond | 237 | 52 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Kutzneria | Kutzneria sp. 744 | ||
| 31311299 | 31311299 | PRJNA561138_P_NODE_18075_length_307_cov_1.316239_g17880_i0 | PRJNA561138 | 18075 | 307 | 1.316239 | 4.04085373 | Streptomyces | 1883 | Bacteria | Bacteria | 192 | 6.72e-61 | NR | WP_392036314.1 | 1883 | g17880 | i0 | 100 | 0.996742671009772 | 102 | 0 | 99.7 | 0 | 306 | 1 | 3 | 104 | WP_392036314.1 MULTISPECIES: hypothetical protein [Streptomyces] | diamond | 306 | 192 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 32007342 | 32007342 | PRJNA561138_P_NODE_17978_length_308_cov_1.208511_g17783_i0 | PRJNA561138 | 17978 | 308 | 1.208511 | 3.72221388 | Streptomyces ficellus | 1977088 | Bacteria | Bacteria | 43.9 | 0.0305 | NR | QGV79309.1 | 1977088 | g17783 | i0 | 37.2 | 0.915584415584416 | 94 | 55 | 89.6 | 2 | 299 | 24 | 97 | 188 | QGV79309.1 DUF2786 domain-containing protein [Streptomyces ficellus] | diamond | 282 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces ficellus | ||
| 32038992 | 32038992 | PRJNA561138_P_NODE_30098_length_241_cov_0.916667_g29903_i0 | PRJNA561138 | 30098 | 241 | 0.916667 | 2.20916747 | Ilumatobacter fluminis | 467091 | Bacteria | Bacteria | 154 | 3.9e-42 | NR | WP_243839136.1 | 467091 | g29903 | i0 | 100 | 1.96680497925311 | 79 | 0 | 98.3 | 0 | 3 | 239 | 100 | 178 | WP_243839136.1 proteasome ATPase [Ilumatobacter fluminis] | diamond | 474 | 154 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacter | Ilumatobacter fluminis | ||
| 32134002 | 32134002 | PRJNA561138_P_NODE_26958_length_247_cov_0.885057_g26763_i0 | PRJNA561138 | 26958 | 247 | 0.885057 | 2.18609079 | Streptomyces sp. ms191 | 1827978 | Bacteria | Bacteria | 43.5 | 0.0188 | NR | TXS09982.1 | 1827978 | g26763 | i0 | 50 | 0.631578947368421 | 52 | 24 | 63.2 | 1 | 82 | 237 | 107 | 156 | TXS09982.1 hypothetical protein EAO71_36615, partial [Streptomyces sp. ms191] | diamond | 156 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. ms191 | ||
| 32197227 | 32197227 | PRJNA561138_P_NODE_25758_length_249_cov_0.875000_g25563_i0 | PRJNA561138 | 25758 | 249 | 0.875 | 2.17875 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 157 | 1.9699999999999998e-42 | NR | MFQ5555457.1 | 2080302 | g25563 | i0 | 84 | 9.79518072289157 | 81 | 13 | 97.6 | 0 | 2 | 244 | 519 | 599 | MFQ5555457.1 2-oxoacid:acceptor oxidoreductase family protein [Acidimicrobiia bacterium] | diamond | 2439 | 157 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 32639483 | 32639483 | PRJNA561138_P_NODE_11720_length_379_cov_1.006536_g11525_i0 | PRJNA561138 | 11720 | 379 | 1.006536 | 3.81477144 | Ilumatobacter fluminis | 467091 | Bacteria | Bacteria | 206 | 3.08e-65 | NR | WP_133869404.1 | 467091 | g11525 | i0 | 99 | 0.767810026385224 | 97 | 1 | 76.8 | 0 | 292 | 2 | 1 | 97 | WP_133869404.1 HAD family hydrolase [Ilumatobacter fluminis] | diamond | 291 | 206 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacter | Ilumatobacter fluminis | ||
| 32860145 | 32860145 | PRJNA561138_P_NODE_12220_length_372_cov_1.287625_g12025_i0 | PRJNA561138 | 12220 | 372 | 1.287625 | 4.789965 | Dactylosporangium sp. NPDC | 60453 | Bacteria | Bacteria | 79.3 | 1.1e-14 | NR | WP_360378265.1 | 3155647 | g12025 | i0 | 72.5 | 0.814516129032258 | 51 | 14 | 41.1 | 0 | 219 | 371 | 1 | 51 | WP_360378265.1 NAD(P)-dependent alcohol dehydrogenase [Dactylosporangium sp. NPDC049140] | diamond | 303 | 79.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Dactylosporangium | Dactylosporangium sp. NPDC049140 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;