RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA561138" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA561138 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3096078 3096078 PRJNA561138_P_NODE_26543_length_248_cov_0.880000_g26348_i0 PRJNA561138 26543 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 140 5.27e-38   NR WP_023069674.1 118322 g26348 i0 80.5 33.6653225806452 82 16 99.2 0 3 248 125 206 WP_023069674.1 alkene reductase [Lyngbya aestuarii] diamond 8349 141 0.99290780141844 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Lyngbya Lyngbya aestuarii
31027112 31027112 PRJNA561138_P_NODE_25435_length_250_cov_0.864407_g25240_i0 PRJNA561138 25435 250 0.864407 2.1610175 Leptolyngbya sp. 47254 Bacteria Bacteria 43.5 0.0222   NR MEB3269333.1 47254 g25240 i0 40.7 0.648 54 30 64.8 1 222 61 169 220 MEB3269333.1 glycosyltransferase family 39 protein [Leptolyngbya sp.] diamond 162 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;