RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA560932" and tax_phylum = "Candidatus Coatesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Coatesiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31722476 31722476 PRJNA560932_P_NODE_55837_length_249_cov_0.875000_g55481_i0 PRJNA560932 55837 249 0.875 2.17875 Candidatus Coatesbacteria bacterium 2250272 Bacteria Bacteria 55.1 1.61e-6   NR UCH78262.1 2250272 g55481 i0 51.1 1.7710843373494 47 22 56.6 1 17 157 29 74 UCH78262.1 MAG: 6-bladed beta-propeller [Candidatus Coatesbacteria bacterium] diamond 441 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Coatesiibacteriota         Candidatus Coatesbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;