RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA560932" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27931906 27931906 PRJNA560932_P_NODE_60045_length_246_cov_0.890173_g59689_i0 PRJNA560932 60045 246 0.890173 2.18982558 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 67.4 8.28e-11   NR HEY2773232.1 2838779 g59689 i0 47.4 2.75609756097561 78 34 91.5 5 228 4 339 412 HEY2773232.1 hypothetical protein [Candidatus Binatia bacterium] diamond 678 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27931922 27931922 PRJNA560932_P_NODE_8785_length_586_cov_5.446394_g8432_i0 PRJNA560932 8785 586 5.446394 31.91586884 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 150 1.19e-41   NR MET0151620.1 2838779 g8432 i0 47.1 1.93003412969283 187 93 92.7 3 559 17 8 194 MET0151620.1 glutathione S-transferase [Candidatus Binatia bacterium] diamond 1131 150 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29257778 29257778 PRJNA560932_P_NODE_9_length_5446_cov_14.379862_g5_i0 PRJNA560932 9 5446 14.379862 783.12728452 Candidatus Binatus sp. 2811406 Bacteria Bacteria 358 5.519999999999999e-96   NR HSV04923.1 2811406 g5 i0 30.6 0.834006610356225 1514 781 76.6 61 38 4207 611 1978 HSV04923.1 hypothetical protein [Candidatus Binatus sp.] diamond 4542 358 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
30742548 30742548 PRJNA560932_P_NODE_56694_length_248_cov_0.880000_g56338_i0 PRJNA560932 56694 248 0.88 2.1824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 57 3.54e-7   NR HEY2772704.1 2838779 g56338 i0 45.8 0.713709677419355 59 32 71.4 0 200 24 123 181 HEY2772704.1 IPT/TIG domain-containing protein [Candidatus Binatia bacterium] diamond 177 57 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;