RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA560029" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA560029 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28278904 28278904 PRJNA560029_S_NODE_26006_length_275_cov_1.648515_g25782_i0 PRJNA560029 26006 275 1.648515 4.53341625 Sopatryd virus 3131622 Viruses Viruses 44.7 0.011   NR WZH61674.1 3131622 g25782 i0 34.1 0.894545454545455 82 39 73.1 2 211 11 1 82 WZH61674.1 MAG: maturation protein [Sopatryd virus] diamond 246 44.7 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopatryd virus
30615991 30615991 PRJNA560029_S_NODE_22593_length_290_cov_3.852535_g22369_i0 PRJNA560029 22593 290 3.852535 11.1723515 Caudoviricetes sp. 2832643 Viruses Viruses 61.6 1.1e-8   NR XOR77704.1 2832643 g22369 i0 43.5 0.713793103448276 69 38 71.4 1 287 81 7 74 XOR77704.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 207 61.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32292359 32292359 PRJNA560029_S_NODE_5619_length_422_cov_9.819484_g5395_i0 PRJNA560029 5619 422 9.819484 41.43822248 ssRNA phage SRR696 3429138 Viruses Viruses 129 9.48e-33   NR YP_010769112.1 2786515 g5395 i0 51.1 2.00473933649289 141 63 97.4 2 1 411 257 395 YP_010769112.1 maturation protein [ssRNA phage SRR6960507_5] diamond 846 129 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Haeldovirus Haeldovirus asiohabitans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;