RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA559720" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA559720 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28278885 28278885 PRJNA559720_P_NODE_10826_length_292_cov_1.324201_g10687_i0 PRJNA559720 10826 292 1.324201 3.86666692 Candidatus Curtissbacteria bacterium 2750075 Bacteria Bacteria 58.9 3.23e-8   NR MCR4324436.1 2750075 g10687 i0 35.2 0.904109589041096 88 53 90.4 2 23 286 77 160 MCR4324436.1 universal stress protein [Candidatus Curtissbacteria bacterium] diamond 264 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium
30710816 30710816 PRJNA559720_P_NODE_11374_length_283_cov_1.823810_g11235_i0 PRJNA559720 11374 283 1.82381 5.1613823 Patescibacteria group bacterium 2052139 Bacteria Bacteria 68.2 5.6e-11   NR MFA7286505.1 2052139 g11235 i0 40 4.21908127208481 75 45 79.5 0 3 227 283 357 MFA7286505.1 molecular chaperone DnaJ [Patescibacteria group bacterium] diamond 1194 68.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;