RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA558770" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA558770 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29478628 29478628 PRJNA558770_P_NODE_391010_length_173_cov_3.318841_g389005_i0 PRJNA558770 391010 173 3.318841 5.74159493 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 113 1.33e-27   NR QTE03983.1 2794515 g389005 i0 91.2 0.988439306358382 57 5 98.8 0 3 173 388 444 QTE03983.1 MAG: capsid protein, partial [Luscinia sibilans parvo-like hybrid virus] diamond 171 113 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
31690752 31690752 PRJNA558770_P_NODE_379677_length_219_cov_6.048913_g377672_i0 PRJNA558770 379677 219 6.048913 13.24711947 Parvoviridae sp. 1940570 Viruses Viruses 44.7 0.00555   NR XNT21158.1 1940570 g377672 i0 51.1 0.616438356164384 45 22 61.6 0 45 179 358 402 XNT21158.1 MAG: replication protein [Parvoviridae sp.] diamond 135 44.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;