RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA558770" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA558770 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26903271 26903271 PRJNA558770_P_NODE_269081_length_234_cov_1.924623_g267076_i0 PRJNA558770 269081 234 1.924623 4.50361782 Bacteria 2 Bacteria Bacteria 45.4 0.00238   NR OHA15548.1 1802298 g267076 i0 80 4.73076923076923 25 5 32.1 0 159 233 109 133 OHA15548.1 MAG: repressor LexA [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_43_47] diamond 1107 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_01_FULL_43_47
31247925 31247925 PRJNA558770_P_NODE_123835_length_234_cov_8.758794_g121830_i0 PRJNA558770 123835 234 8.758794 20.49557796 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 43.1 0.0157   NR MDB5204094.1 2052153 g121830 i0 79.2 0.307692307692308 24 5 30.8 0 160 231 79 102 MDB5204094.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 72 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
31342928 31342928 PRJNA558770_P_NODE_266796_length_234_cov_1.969849_g264791_i0 PRJNA558770 266796 234 1.969849 4.60944666 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 61.2 9.1e-9   NR MBU3669072.1 2052153 g264791 i0 45.5 1.93589743589744 77 13 98.7 1 233 3 198 245 MBU3669072.1 AAA family ATPase [Candidatus Taylorbacteria bacterium] diamond 453 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
31658978 31658978 PRJNA558770_P_NODE_197417_length_234_cov_3.884422_g195412_i0 PRJNA558770 197417 234 3.884422 9.08954748 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 64.7 5.08e-10   NR MDB5259078.1 2052153 g195412 i0 53.9 0.974358974358974 76 10 97.4 1 232 5 281 331 MDB5259078.1 carbohydrate kinase PfkB, ribokinase [Candidatus Taylorbacteria bacterium] diamond 228 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;