contig_metadata
2 rows where analysis = "diamond", bioproject = "PRJNA558770" and tax_phylum = "Candidatus Chisholmiibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27331949 | 27331949 | PRJNA558770_P_NODE_213983_length_234_cov_3.281407_g211978_i0 | PRJNA558770 | 213983 | 234 | 3.281407 | 7.67849238 | Candidatus Chisholmbacteria bacterium | 2750073 | Bacteria | Bacteria | 52.8 | 9.89e-6 | NR | MBI4034956.1 | 2750073 | g211978 | i0 | 84 | 0.320512820512821 | 25 | 4 | 32.1 | 0 | 234 | 160 | 520 | 544 | MBI4034956.1 VanW family protein [Candidatus Chisholmbacteria bacterium] | diamond | 75 | 52.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Chisholmiibacteriota | Candidatus Chisholmbacteria bacterium | ||||||
| 31247922 | 31247922 | PRJNA558770_P_NODE_117875_length_234_cov_9.482412_g115870_i0 | PRJNA558770 | 117875 | 234 | 9.482412 | 22.18884408 | Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_ | 2750073 | Bacteria | Bacteria | 50.8 | 4.75e-5 | NR | OGY17091.1 | 1797589 | g115870 | i0 | 95.2 | 0.269230769230769 | 21 | 1 | 26.9 | 0 | 222 | 160 | 648 | 668 | OGY17091.1 MAG: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12] | diamond | 63 | 50.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Chisholmiibacteriota | Candidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;