RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA558770" and tax_phylum = "Candidatus Amesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Amesiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA558770 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27489766 27489766 PRJNA558770_P_NODE_200263_length_234_cov_3.768844_g198258_i0 PRJNA558770 200263 234 3.768844 8.81909496 Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23 1797263 Bacteria Bacteria 46.2 0.00205   NR OGD09590.1 1797263 g198258 i0 84 0.320512820512821 25 4 32.1 0 160 234 304 328 OGD09590.1 MAG: hypothetical protein A2397_02810 [Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23] diamond 75 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium RIFOXYB1_FULL_44_23
28184076 28184076 PRJNA558770_P_NODE_199586_length_234_cov_3.798995_g197581_i0 PRJNA558770 199586 234 3.798995 8.8896483 Candidatus Amesbacteria bacterium GW2 1932011 Bacteria Bacteria 46.2 0.00129   NR KKT57362.1 1618351 g197581 i0 91.7 0.307692307692308 24 2 30.8 0 161 232 150 173 KKT57362.1 MAG: hypothetical protein UW51_C0010G0016 [Candidatus Amesbacteria bacterium GW2011_GWA1_44_24] diamond 72 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium GW2011_GWA1_44_24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;