RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA557895" and tax_clade = "sulfur-oxidizing symbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • sulfur-oxidizing symbionts · 2 ✖

bioproject 1

  • PRJNA557895 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26857707 26857707 PRJNA557895_P_NODE_6341_length_356_cov_1.918567_g5986_i0 PRJNA557895 6341 356 1.918567 6.83009852 Bathymodiolus azoricus thioautotrophic gill symbiont 235205 Bacteria Bacteria 45.4 0.0152   NR WP_202775563.1 235205 g5986 i0 56.1 0.345505617977528 41 18 34.6 0 24 146 215 255 WP_202775563.1 reverse transcriptase domain-containing protein, partial [Bathymodiolus azoricus thioautotrophic gill symbiont] diamond 123 45.4 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria       Bathymodiolus azoricus thioautotrophic gill symbiont
27268460 27268460 PRJNA557895_P_NODE_22443_length_196_cov_1.040816_g22088_i0 PRJNA557895 22443 196 1.040816 2.03999936 Solemya velum gill symbiont 2340 Bacteria Bacteria 42.7 0.0084   NR WP_143556208.1 2340 g22088 i0 38.1 1.25510204081633 42 26 64.3 0 12 137 45 86 WP_143556208.1 RNA-directed DNA polymerase, partial [Solemya velum gill symbiont] diamond 246 42.7 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria       Solemya velum gill symbiont

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;