RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA557436" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA557436 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26762248 26762248 PRJNA557436_S_NODE_401_length_547_cov_3.046875_g359_i0 PRJNA557436 401 547 3.046875 16.66640625 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 156 1.49e-42   NR NBP56840.1 2802965 g359 i0 59.2 1.56855575868373 142 50 73.5 4 4 405 230 371 NBP56840.1 glycosyltransferase [Candidatus Elulimicrobium humile] diamond 858 156 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
30204947 30204947 PRJNA557436_S_NODE_7112_length_163_cov_3.171875_g7064_i0 PRJNA557436 7112 163 3.171875 5.17015625 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 57.4 8.61e-8   NR NBP55571.1 2802965 g7064 i0 56.4 3.03680981595092 55 21 99.4 2 163 2 94 146 NBP55571.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 495 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
30363605 30363605 PRJNA557436_S_NODE_1492_length_302_cov_2.599251_g1444_i0 PRJNA557436 1492 302 2.599251 7.84973802 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 50.1 1.97e-4   NR NBP58099.1 2802965 g1444 i0 34.2 1.10264900662252 111 61 99.3 5 2 301 170 279 NBP58099.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 333 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31026856 31026856 PRJNA557436_S_NODE_6095_length_172_cov_1.459854_g6047_i0 PRJNA557436 6095 172 1.459854 2.51094888 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 72.4 4.82e-13   NR NBP57938.1 2802965 g6047 i0 60.7 0.976744186046512 56 22 97.7 0 5 172 162 217 NBP57938.1 glycosyltransferase [Candidatus Elulimicrobium humile] diamond 168 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31627390 31627390 PRJNA557436_S_NODE_1696_length_285_cov_2.388000_g1648_i0 PRJNA557436 1696 285 2.388 6.8058 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 45.1 0.00858   NR NBP57572.1 2802965 g1648 i0 50 0.526315789473684 50 24 52.6 1 164 15 37 85 NBP57572.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 150 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
32196965 32196965 PRJNA557436_S_NODE_2118_length_258_cov_3.026906_g2070_i0 PRJNA557436 2118 258 3.026906 7.80941748 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 98.6 1.02e-21   NR NBP55571.1 2802965 g2070 i0 53.5 1 86 39 100 1 258 1 148 232 NBP55571.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 258 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;