RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA557436" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 2 ✖

bioproject 1

  • PRJNA557436 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30615839 30615839 PRJNA557436_S_NODE_2993_length_223_cov_1.989362_g2945_i0 PRJNA557436 2993 223 1.989362 4.43627726 Cressdnaviricota sp. 2748378 Viruses Viruses 90.5 9.66e-20   NR AXH76405.1 2748378 g2945 i0 60.9 0.928251121076233 69 27 92.8 0 3 209 195 263 AXH76405.1 MAG: Rep [Cressdnaviricota sp.] diamond 207 90.5 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
31058637 31058637 PRJNA557436_S_NODE_1675_length_287_cov_2.400794_g1627_i0 PRJNA557436 1675 287 2.400794 6.89027878 Ulva CRESS virus 1 3050505 Viruses Viruses 51.6 4.19e-5   NR WIF20460.1 3050505 g1627 i0 42.6 0.564459930313589 54 31 56.4 0 4 165 54 107 WIF20460.1 MAG: putative viral replication protein [Ulva CRESS virus 1] diamond 162 51.6 1 Viruses   Shotokuvirae Cressdnaviricota         Ulva CRESS virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;