RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA557436" and tax_clade = "Opisthokonta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_kingdom 2

tax_superkingdom 1

tax_clade 1

  • Opisthokonta · 15 ✖

bioproject 1

  • PRJNA557436 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26794069 26794069 PRJNA557436_S_NODE_421_length_537_cov_2.386454_g379_i0 PRJNA557436 421 537 2.386454 12.81525798 Gnathostoma spinigerum 75299 Nematoda Nematoda 141 1.4099999999999999e-40   NR MFH4985130.1 75299 g379 i0 91 0.374301675977654 67 6 37.4 0 253 53 1 67 MFH4985130.1 hypothetical protein [Gnathostoma spinigerum] diamond 201 141 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
27236830 27236830 PRJNA557436_S_NODE_5143_length_182_cov_3.904762_g5095_i0 PRJNA557436 5143 182 3.904762 7.10666684 Aspergillus fumigatus 746128 Fungi Fungi 115 1.78e-29   NR KAH2778379.1 746128 g5095 i0 100 0.989010989010989 60 0 98.9 0 181 2 217 276 KAH2778379.1 hypothetical protein KXW38_008521, partial [Aspergillus fumigatus] diamond 180 115 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
27868397 27868397 PRJNA557436_S_NODE_8645_length_154_cov_1.478992_g8597_i0 PRJNA557436 8645 154 1.478992 2.27764768 Aspergillus fumigatus 746128 Fungi Fungi 100 5.29e-25   NR KAH2841833.1 746128 g8597 i0 100 0.993506493506494 51 0 99.4 0 1 153 62 112 KAH2841833.1 hypothetical protein KXW36_000816, partial [Aspergillus fumigatus] diamond 153 100 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
27963220 27963220 PRJNA557436_S_NODE_3165_length_218_cov_2.967213_g3117_i0 PRJNA557436 3165 218 2.967213 6.46852434 Aspergillus fumigatus 746128 Fungi Fungi 77.4 8.03e-15   NR KAH2778379.1 746128 g3117 i0 94.7 0.522935779816514 38 2 52.3 0 104 217 75 112 KAH2778379.1 hypothetical protein KXW38_008521, partial [Aspergillus fumigatus] diamond 114 77.4 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
28089451 28089451 PRJNA557436_S_NODE_4125_length_197_cov_2.530864_g4077_i0 PRJNA557436 4125 197 2.530864 4.98580208 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 54.3 1.68e-6   NR CAI9150999.1 3082113 g4077 i0 96.6 0.441624365482233 29 1 44.2 0 1 87 501 529 CAI9150999.1 unnamed protein product, partial [Rangifer tarandus platyrhynchus] diamond 87 54.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
28089463 28089463 PRJNA557436_S_NODE_825_length_392_cov_2.806723_g777_i0 PRJNA557436 825 392 2.806723 11.00235416 Apiospora phragmitis 2905665 Fungi Fungi 60.8 6.84e-8   NR XP_066709719.1 2905665 g777 i0 37.6 0.650510204081633 85 40 55.1 1 387 172 147 231 XP_066709719.1 uncharacterized protein PG994_013349 [Apiospora phragmitis] diamond 255 60.8 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Amphisphaeriales Apiosporaceae Apiospora Apiospora phragmitis
29226452 29226452 PRJNA557436_S_NODE_4729_length_187_cov_2.440789_g4681_i0 PRJNA557436 4729 187 2.440789 4.56427543 Pararge aegeria aegeria 348720 Arthropoda Arthropoda 40.8 0.0333   NR CAH2246697.1 348720 g4681 i0 32.3 0.994652406417112 62 39 94.7 1 10 186 38 99 CAH2246697.1 jg3536 [Pararge aegeria aegeria] diamond 186 40.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Nymphalidae Pararge Pararge aegeria
29352602 29352602 PRJNA557436_S_NODE_3709_length_205_cov_2.517647_g3661_i0 PRJNA557436 3709 205 2.517647 5.16117635 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 42 0.0441   NR PJF18462.1 1246581 g3661 i0 38.9 0.790243902439024 54 31 79 1 178 17 967 1018 PJF18462.1 Wd-repeat-containing protein [Paramicrosporidium saccamoebae] diamond 162 42 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29952460 29952460 PRJNA557436_S_NODE_1951_length_268_cov_1.733906_g1903_i0 PRJNA557436 1951 268 1.733906 4.64686808 Aspergillus fumigatus 746128 Fungi Fungi 127 4.6099999999999995e-35   NR KAH2821898.1 746128 g1903 i0 97 0.75 67 2 75 0 201 1 20 86 KAH2821898.1 hypothetical protein KXV85_002502, partial [Aspergillus fumigatus] diamond 201 127 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
29952462 29952462 PRJNA557436_S_NODE_2391_length_245_cov_2.595238_g2343_i0 PRJNA557436 2391 245 2.595238 6.3583331 Aspergillus fumigatus 746128 Fungi Fungi 164 3.22e-48   NR KAH2778379.1 746128 g2343 i0 100 0.991836734693878 81 0 99.2 0 3 245 111 191 KAH2778379.1 hypothetical protein KXW38_008521, partial [Aspergillus fumigatus] diamond 243 164 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
30489612 30489612 PRJNA557436_S_NODE_6733_length_166_cov_2.175573_g6685_i0 PRJNA557436 6733 166 2.175573 3.61145118 Aspergillus fumigatus 746128 Fungi Fungi 82.4 1.95e-18   NR KAH2843171.1 746128 g6685 i0 94.9 0.704819277108434 39 2 70.5 0 50 166 76 114 KAH2843171.1 hypothetical protein KXW36_000308, partial [Aspergillus fumigatus] diamond 117 82.4 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus
31135252 31135252 PRJNA557436_S_NODE_6375_length_169_cov_2.074627_g6327_i0 PRJNA557436 6375 169 2.074627 3.50611963 root 1 Root_unresolved Root_unresolved 70.5 2.19e-12   NR KOC58562.1 597456 g6327 i0 61.1 5.48520710059172 54 21 95.9 0 3 164 915 968 KOC58562.1 Uncharacterized protein yejH [Habropoda laboriosa] diamond 927 70.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Habropoda Habropoda laboriosa
31451952 31451952 PRJNA557436_S_NODE_7596_length_160_cov_1.600000_g7548_i0 PRJNA557436 7596 160 1.6 2.56 Saccharomyces 4930 Fungi Fungi 111 7.78e-27   NR ONH78992.1 4932 g7548 i0 98.1 2.925 52 1 97.5 0 2 157 413 464 ONH78992.1 Alanine--glyoxylate aminotransferase 1 [Saccharomyces cerevisiae] diamond 468 111 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
32527709 32527709 PRJNA557436_S_NODE_3519_length_209_cov_5.051724_g3471_i0 PRJNA557436 3519 209 5.051724 10.55810316 Artiodactyla 91561 Chordata Chordata 47.4 5.67e-4   NR XP_069396403.1 9728 g3471 i0 70.3 2.32535885167464 37 10 53.1 1 140 30 115 150 XP_069396403.1 collagen alpha-1(I) chain-like, partial [Delphinus delphis] diamond 486 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Delphinus Delphinus delphis
32796707 32796707 PRJNA557436_S_NODE_3780_length_204_cov_1.343195_g3732_i0 PRJNA557436 3780 204 1.343195 2.7401178 Aspergillus fumigatus 746128 Fungi Fungi 120 2.18e-32   NR KAH2823818.1 746128 g3732 i0 100 0.985294117647059 67 0 98.5 0 202 2 57 123 KAH2823818.1 hypothetical protein KXV85_001434, partial [Aspergillus fumigatus] diamond 201 120 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus fumigatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;