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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10732840 10732840 PRJNA556992_P_NODE_43269_length_542_cov_4.588486_g41117_i0 PRJNA556992 43269 542 4.588486 24.86959412 root 1 Root_unresolved Root_unresolved 58.9 1.64e-6   NR MBQ8753401.1 2053569 g41117 i0 46.2 0.985239852398524 52 28 28.8 0 281 436 256 307 MBQ8753401.1 collagen-like protein [Lentisphaeria bacterium] diamond 534 59.3 0.993254637436762 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
26698516 26698516 PRJNA556992_P_NODE_464261_length_270_cov_2.837563_g462072_i0 PRJNA556992 464261 270 2.837563 7.6614201 Lentisphaeria bacterium 2053569 Bacteria Bacteria 86.7 1.95e-17   NR MFT5082986.1 2053569 g462072 i0 54.4 1 90 41 100 0 1 270 723 812 MFT5082986.1 chromosome segregation protein [Lentisphaeria bacterium] diamond 270 86.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27457680 27457680 PRJNA556992_P_NODE_1010343_length_229_cov_4.230769_g1008153_i0 PRJNA556992 1010343 229 4.230769 9.68846101 Lentisphaeria bacterium 2053569 Bacteria Bacteria 47.8 5.55e-4   NR MDD4539355.1 2053569 g1008153 i0 46.9 3.48471615720524 49 14 64.2 1 4 150 297 333 MDD4539355.1 FG-GAP-like repeat-containing protein [Lentisphaeria bacterium] diamond 798 47.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27868007 27868007 PRJNA556992_P_NODE_323285_length_285_cov_3.594340_g321096_i0 PRJNA556992 323285 285 3.59434 10.243869 Lentisphaerota bacterium 1932692 Bacteria Bacteria 63.9 1.86e-9   NR MBE6389773.1 1932692 g321096 i0 44.7 3.15789473684211 85 33 74.7 2 214 2 177 261 MBE6389773.1 hypothetical protein [Lentisphaerota bacterium] diamond 900 63.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28310177 28310177 PRJNA556992_P_NODE_161006_length_350_cov_4.628159_g158818_i0 PRJNA556992 161006 350 4.628159 16.1985565 Victivallaceae bacterium 2793042 Bacteria Bacteria 154 1.1e-40   NR MCF6174175.1 2793042 g158818 i0 61.2 2.95714285714286 116 44 99.4 1 349 2 363 477 MCF6174175.1 N-6 DNA methylase [Victivallaceae bacterium] diamond 1035 154 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae   Victivallaceae bacterium
28310621 28310621 PRJNA556992_P_NODE_955706_length_235_cov_2.827160_g953516_i0 PRJNA556992 955706 235 2.82716 6.643826 Victivallales bacterium 2212475 Bacteria Bacteria 40.8 0.0396   NR MBQ2337007.1 2212475 g953516 i0 51.4 0.446808510638298 35 15 44.7 1 136 32 18 50 MBQ2337007.1 hypothetical protein [Victivallales bacterium] diamond 105 40.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
28373119 28373119 PRJNA556992_P_NODE_1142566_length_203_cov_5.053846_g1140375_i0 PRJNA556992 1142566 203 5.053846 10.25930738 Victivallis sp. Marseille-Q1 2049020 Bacteria Bacteria 83.6 8.04e-17   NR WP_176012074.1 2717288 g1140375 i0 53.7 0.990147783251232 67 31 99 0 201 1 249 315 WP_176012074.1 oligosaccharide flippase family protein [Victivallis sp. Marseille-Q1083] diamond 201 83.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis sp. Marseille-Q1083
29194492 29194492 PRJNA556992_P_NODE_47869_length_521_cov_3.352679_g45711_i0 PRJNA556992 47869 521 3.352679 17.46745759 Lentisphaerota bacterium 1932692 Bacteria Bacteria 116 8.17e-29   NR NLG15132.1 1932692 g45711 i0 48.3 0.834932821497121 145 66 80 3 502 86 56 197 NLG15132.1 dTMP kinase [Lentisphaerota bacterium] diamond 435 116 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30078604 30078604 PRJNA556992_P_NODE_865472_length_242_cov_3.863905_g863282_i0 PRJNA556992 865472 242 3.863905 9.3506501 Lentisphaerota bacterium 1932692 Bacteria Bacteria 56.6 4.63e-7   NR MBT3374196.1 1932692 g863282 i0 31.3 0.991735537190083 80 54 99.2 1 2 241 371 449 MBT3374196.1 hypothetical protein [Lentisphaerota bacterium] diamond 240 56.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30331865 30331865 PRJNA556992_P_NODE_554792_length_262_cov_3.984127_g552603_i0 PRJNA556992 554792 262 3.984127 10.43841274 Lentisphaerota bacterium 1932692 Bacteria Bacteria 43.1 0.031   NR MBE6375876.1 1932692 g552603 i0 30.9 0.778625954198473 68 45 77.9 1 221 18 110 175 MBE6375876.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Lentisphaerota bacterium] diamond 204 43.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30409173 30409173 PRJNA556992_P_NODE_548933_length_263_cov_1.831579_g546744_i0 PRJNA556992 548933 263 1.831579 4.81705277 Pseudomonadati 3379134 Bacteria Bacteria 43.9 0.0169   NR WP_274312964.1 1111041 g546744 i0 88 1.6425855513308 25 3 28.5 0 259 185 225 249 WP_274312964.1 type II secretion system protein [Lentisphaera marina] diamond 432 44.3 0.99097065462754 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera marina
30868455 30868455 PRJNA556992_P_NODE_720014_length_250_cov_1.644068_g717825_i0 PRJNA556992 720014 250 1.644068 4.11017 Lentisphaeria bacterium 2053569 Bacteria Bacteria 104 1.42e-24   NR HCG25191.1 2053569 g717825 i0 94.7 0.684 57 3 68.4 0 79 249 1 57 HCG25191.1 KpsF/GutQ family sugar-phosphate isomerase [Lentisphaeria bacterium] diamond 171 104 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31058312 31058312 PRJNA556992_P_NODE_369215_length_280_cov_1.405797_g367026_i0 PRJNA556992 369215 280 1.405797 3.9362316 Lentisphaerota bacterium 1932692 Bacteria Bacteria 97.4 3.8900000000000003e-22   NR NQT92109.1 1932692 g367026 i0 52.2 0.964285714285714 90 42 96.4 1 3 272 71 159 NQT92109.1 glycosyltransferase family 2 protein [Lentisphaerota bacterium] diamond 270 97.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
31183832 31183832 PRJNA556992_P_NODE_1010255_length_229_cov_4.282051_g1008065_i0 PRJNA556992 1010255 229 4.282051 9.80589679 Lentisphaeria bacterium 2053569 Bacteria Bacteria 82.4 2.73e-16   NR MBQ4329493.1 2053569 g1008065 i0 54.7 2.92139737991266 75 33 98.3 1 1 225 326 399 MBQ4329493.1 acetylxylan esterase [Lentisphaeria bacterium] diamond 669 82.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31690565 31690565 PRJNA556992_P_NODE_884157_length_241_cov_4.309524_g881967_i0 PRJNA556992 884157 241 4.309524 10.38595284 Lentisphaeria bacterium 2053569 Bacteria Bacteria 42.4 0.0177   NR HAR65256.1 2053569 g881967 i0 36.5 0.921161825726141 74 43 92.1 2 3 224 20 89 HAR65256.1 hypothetical protein [Lentisphaeria bacterium] diamond 222 42.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32038737 32038737 PRJNA556992_P_NODE_970798_length_233_cov_4.900000_g968608_i0 PRJNA556992 970798 233 4.9 11.417 Victivallales bacterium 2212475 Bacteria Bacteria 136 4.15e-35   NR MBQ7652123.1 2212475 g968608 i0 80.5 2.97424892703863 77 15 99.1 0 3 233 220 296 MBQ7652123.1 DNA mismatch repair protein MutS [Victivallales bacterium] diamond 693 136 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
32133378 32133378 PRJNA556992_P_NODE_290998_length_290_cov_2.087558_g288809_i0 PRJNA556992 290998 290 2.087558 6.0539182 Lentisphaerota bacterium 1932692 Bacteria Bacteria 60.1 5.26e-8   NR NLB65145.1 1932692 g288809 i0 67.5 0.755172413793103 40 13 41.4 0 3 122 136 175 NLB65145.1 hypothetical protein [Lentisphaerota bacterium] diamond 219 60.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
32684906 32684906 PRJNA556992_P_NODE_887940_length_241_cov_2.773810_g885750_i0 PRJNA556992 887940 241 2.77381 6.6848821 Bacteria 2 Bacteria Bacteria 50.4 6.51e-5   NR MBM4143302.1 1932692 g885750 i0 92 3.99585062240664 25 2 31.1 0 77 3 2 26 MBM4143302.1 Gfo/Idh/MocA family oxidoreductase [Lentisphaerota bacterium] diamond 963 50.8 0.992125984251969 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;