RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Kiritimatiellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA556992 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3082213 3082213 PRJNA556992_P_NODE_645283_length_255_cov_2.467033_g643094_i0 PRJNA556992 645283 255 2.467033 6.29093415 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 120 1.97e-29   NR MEI7851531.1 2202731 g643094 i0 76.2 0.988235294117647 84 20 98.8 0 254 3 823 906 MEI7851531.1 putative Ig domain-containing protein [Kiritimatiellales bacterium] diamond 252 120 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium
3082945 3082945 PRJNA556992_P_NODE_705083_length_251_cov_0.865169_g702894_i0 PRJNA556992 705083 251 0.865169 2.17157419 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 101 9.68e-23   NR MDD4061288.1 2212473 g702894 i0 76.1 0.848605577689243 71 12 84.9 2 251 39 134 199 MDD4061288.1 hypothetical protein [Kiritimatiellia bacterium] diamond 213 101 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27078526 27078526 PRJNA556992_P_NODE_428622_length_274_cov_1.233831_g426433_i0 PRJNA556992 428622 274 1.233831 3.38069694 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 160 1.48e-46   NR MDD4060236.1 2212473 g426433 i0 79.1 0.996350364963504 91 19 99.6 0 274 2 122 212 MDD4060236.1 hypothetical protein [Kiritimatiellia bacterium] diamond 273 160 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27394961 27394961 PRJNA556992_P_NODE_780923_length_247_cov_0.885057_g778733_i0 PRJNA556992 780923 247 0.885057 2.18609079 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 62.4 4.65e-9   NR MBR4258270.1 2212473 g778733 i0 57.4 0.65587044534413 54 22 64.4 1 5 163 515 568 MBR4258270.1 hypothetical protein [Kiritimatiellia bacterium] diamond 162 62.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27489442 27489442 PRJNA556992_P_NODE_544983_length_263_cov_2.852632_g542794_i0 PRJNA556992 544983 263 2.852632 7.50242216 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 64.7 3.37e-10   NR MFA7175014.1 2212473 g542794 i0 70.3 0.422053231939163 37 11 42.2 0 113 3 4 40 MFA7175014.1 hypothetical protein [Kiritimatiellia bacterium] diamond 111 64.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27552373 27552373 PRJNA556992_P_NODE_693344_length_251_cov_3.410112_g691155_i0 PRJNA556992 693344 251 3.410112 8.55938112 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 131 6.1e-35   NR MFA7175015.1 2212473 g691155 i0 77.1 1.9840637450199201 83 19 99.2 0 250 2 117 199 MFA7175015.1 hypothetical protein [Kiritimatiellia bacterium] diamond 498 131 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27583849 27583849 PRJNA556992_P_NODE_155244_length_354_cov_4.163701_g153056_i0 PRJNA556992 155244 354 4.163701 14.73950154 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 45.1 0.0193   NR HOO21993.1 2212473 g153056 i0 41.3 0.779661016949153 92 48 75.4 3 2 268 442 530 HOO21993.1 autotransporter-associated beta strand repeat-containing protein [Kiritimatiellia bacterium] diamond 276 45.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27962759 27962759 PRJNA556992_P_NODE_1135465_length_204_cov_12.748092_g1133274_i0 PRJNA556992 1135465 204 12.748092 26.00610768 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 142 2.71e-39   NR MFA7054871.1 2212473 g1133274 i0 94.1 1 68 4 100 0 1 204 153 220 MFA7054871.1 RRXRR domain-containing protein [Kiritimatiellia bacterium] diamond 204 142 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28626262 28626262 PRJNA556992_P_NODE_631567_length_256_cov_2.841530_g629378_i0 PRJNA556992 631567 256 2.84153 7.2743168 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 102 2.2099999999999994e-23   NR MFA7175017.1 2212473 g629378 i0 65.4 0.9140625 78 27 91.4 0 254 21 324 401 MFA7175017.1 minor capsid protein [Kiritimatiellia bacterium] diamond 234 102 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29068230 29068230 PRJNA556992_P_NODE_605168_length_258_cov_3.308108_g602979_i0 PRJNA556992 605168 258 3.308108 8.53491864 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 148 1.38e-39   NR MDD4061730.1 2212473 g602979 i0 85.9 0.988372093023256 85 12 98.8 0 256 2 251 335 MDD4061730.1 ice-binding family protein [Kiritimatiellia bacterium] diamond 255 148 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29194426 29194426 PRJNA556992_P_NODE_367509_length_280_cov_1.763285_g365320_i0 PRJNA556992 367509 280 1.763285 4.937198 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.5 0.0298   NR HNX34294.1 2212473 g365320 i0 35.4 0.878571428571429 82 42 87.9 3 254 9 80 150 HNX34294.1 hypothetical protein [Kiritimatiellia bacterium] diamond 246 43.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
29572864 29572864 PRJNA556992_P_NODE_1133090_length_205_cov_5.439394_g1130899_i0 PRJNA556992 1133090 205 5.439394 11.1507577 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 65.9 1.43e-10   NR MFA7335064.1 2212473 g1130899 i0 43.8 2.10731707317073 73 35 98 1 203 3 44 116 MFA7335064.1 DUF2800 domain-containing protein [Kiritimatiellia bacterium] diamond 432 65.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30426740 30426740 PRJNA556992_P_NODE_88193_length_421_cov_2.255747_g86011_i0 PRJNA556992 88193 421 2.255747 9.49669487 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.9 0.00795   NR MDX9795148.1 2212473 g86011 i0 45.5 0.391923990498812 55 28 39.2 1 320 156 3 55 MDX9795148.1 aspartate 1-decarboxylase [Kiritimatiellia bacterium] diamond 165 43.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30773770 30773770 PRJNA556992_P_NODE_427774_length_274_cov_1.348259_g425585_i0 PRJNA556992 427774 274 1.348259 3.69422966 Kiritimatiellaeota bacterium B1221 3033806 Bacteria Bacteria 97.4 2.0399999999999994e-24   NR MDF3129787.1 3033806 g425585 i0 76.4 0.602189781021898 55 13 60.2 0 166 2 1 55 MDF3129787.1 DUF6500 family protein [Kiritimatiellaeota bacterium B1221] diamond 165 97.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellaeota bacterium B1221
32006779 32006779 PRJNA556992_P_NODE_379418_length_279_cov_1.223301_g377229_i0 PRJNA556992 379418 279 1.223301 3.41300979 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.1 0.0382   NR MDY3229378.1 2212473 g377229 i0 42 0.537634408602151 50 29 53.8 0 51 200 111 160 MDY3229378.1 RluA family pseudouridine synthase [Kiritimatiellia bacterium] diamond 150 43.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32544896 32544896 PRJNA556992_P_NODE_435259_length_273_cov_1.910000_g433070_i0 PRJNA556992 435259 273 1.91 5.2143 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 120 2.09e-30   NR MBQ6339437.1 2212473 g433070 i0 81.5 1.78021978021978 81 14 87.9 1 242 3 33 113 MBQ6339437.1 hypothetical protein [Kiritimatiellia bacterium] diamond 486 120 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32827973 32827973 PRJNA556992_P_NODE_109160_length_394_cov_4.629283_g106976_i0 PRJNA556992 109160 394 4.629283 18.23937502 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 75.9 7.61e-15   NR HON48058.1 2212473 g106976 i0 39.4 1.36294416243655 94 53 68.5 1 125 394 7 100 HON48058.1 hypothetical protein [Kiritimatiellia bacterium] diamond 537 75.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;