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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA556992" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA556992 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14562223 14562223 PRJNA556992_P_NODE_805112_length_245_cov_7.482558_g802922_i0 PRJNA556992 805112 245 7.482558 18.3322671 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 114 2.35e-28   NR MCB9819773.1 2052152 g802922 i0 66.7 4.93469387755102 81 27 99.2 0 243 1 38 118 MCB9819773.1 flippase-like domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 1209 114 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27141634 27141634 PRJNA556992_P_NODE_960862_length_234_cov_5.031056_g958672_i0 PRJNA556992 960862 234 5.031056 11.77267104 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 130 9.999999999999999e-34   NR MDR3297930.1 2052152 g958672 i0 74.4 1 78 20 100 0 234 1 197 274 MDR3297930.1 recombinase family protein [Candidatus Nomurabacteria bacterium] diamond 234 130 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27661703 27661703 PRJNA556992_P_NODE_465504_length_270_cov_2.385787_g463315_i0 PRJNA556992 465504 270 2.385787 6.4416249 Bacteria 2 Bacteria Bacteria 160 2.71e-46   NR HCC05769.1 2052152 g463315 i0 88.9 11 90 10 100 0 1 270 7 96 HCC05769.1 DNA-directed RNA polymerase subunit alpha [Candidatus Nomurabacteria bacterium] diamond 2970 160 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
28324500 28324500 PRJNA556992_P_NODE_568826_length_261_cov_2.904255_g566637_i0 PRJNA556992 568826 261 2.904255 7.58010555 Pseudomonadati 3379134 Bacteria Bacteria 103 2.5e-23   NR OIP64887.1 1805283 g566637 i0 61.2 3.94252873563218 85 33 97.7 0 260 6 330 414 OIP64887.1 MAG: hypothetical protein AUK15_02815 [Candidatus Nomurabacteria bacterium CG2_30_43_9] diamond 1029 104 0.990384615384615 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium CG2_30_43_9
28499682 28499682 PRJNA556992_P_NODE_152727_length_356_cov_3.042403_g150539_i0 PRJNA556992 152727 356 3.042403 10.83095468 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 79 1.06e-15   NR MCX6757059.1 2052152 g150539 i0 41.9 1.04494382022472 124 60 94.4 1 2 337 27 150 MCX6757059.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 372 79 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
28562942 28562942 PRJNA556992_P_NODE_445327_length_272_cov_2.015075_g443138_i0 PRJNA556992 445327 272 2.015075 5.481004 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 162 1.65e-49   NR HCC06203.1 2052152 g443138 i0 95.4 2.92279411764706 87 4 96 0 261 1 2 88 HCC06203.1 50S ribosomal protein L11 [Candidatus Nomurabacteria bacterium] diamond 795 162 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
28941894 28941894 PRJNA556992_P_NODE_274188_length_295_cov_1.972973_g271999_i0 PRJNA556992 274188 295 1.972973 5.82027035 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 88.2 7.52e-18   NR NVN96639.1 2052152 g271999 i0 51.2 0.854237288135593 84 34 78.3 1 25 255 358 441 NVN96639.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 252 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
28956317 28956317 PRJNA556992_P_NODE_637148_length_256_cov_1.557377_g634959_i0 PRJNA556992 637148 256 1.557377 3.98688512 Bacteria 2 Bacteria Bacteria 144 4.1199999999999997e-38   NR KKT37092.1 1618748 g634959 i0 81.2 62.75390625 85 16 99.6 0 1 255 252 336 KKT37092.1 MAG: Protein translocase subunit SecA [Candidatus Nomurabacteria bacterium GW2011_GWB1_44_12] diamond 16065 145 0.993103448275862 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWB1_44_12
29257006 29257006 PRJNA556992_P_NODE_1067489_length_220_cov_6.544218_g1065298_i0 PRJNA556992 1067489 220 6.544218 14.3972796 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 98.6 1.52e-22   NR MCX6747542.1 2052152 g1065298 i0 75.3 3.98181818181818 73 18 99.5 0 219 1 125 197 MCX6747542.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 876 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30078195 30078195 PRJNA556992_P_NODE_1112012_length_210_cov_4.423358_g1109821_i0 PRJNA556992 1112012 210 4.423358 9.2890518 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 71.2 2.1e-12   NR HCC06478.1 2052152 g1109821 i0 92.5 0.571428571428571 40 3 57.1 0 90 209 1 40 HCC06478.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 120 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30584069 30584069 PRJNA556992_P_NODE_840393_length_244_cov_0.900585_g838203_i0 PRJNA556992 840393 244 0.900585 2.1974274 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 153 1.0899999999999998e-41   NR MDB5259997.1 2052152 g838203 i0 84 7.9672131147541 81 13 99.6 0 1 243 90 170 MDB5259997.1 recJ [Candidatus Nomurabacteria bacterium] diamond 1944 153 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30678420 30678420 PRJNA556992_P_NODE_1048773_length_225_cov_4.875000_g1046583_i0 PRJNA556992 1048773 225 4.875 10.96875 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 101 2.95e-23   NR USN97068.1 2052152 g1046583 i0 71.8 0.946666666666667 71 20 94.7 0 220 8 366 436 USN97068.1 MAG: histidine--tRNA ligase [Candidatus Nomurabacteria bacterium] diamond 213 101 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30724763 30724763 PRJNA556992_P_NODE_682954_length_252_cov_2.575419_g680765_i0 PRJNA556992 682954 252 2.575419 6.49005588 Bacteria 2 Bacteria Bacteria 108 6.240000000000001e-26   NR KKT31217.1 1618757 g680765 i0 62.2 5.80952380952381 82 29 97.6 1 5 250 287 366 KKT31217.1 MAG: Excinuclease ABC, C subunit [Candidatus Nomurabacteria bacterium GW2011_GWD1_44_10] diamond 1464 108 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWD1_44_10
30742100 30742100 PRJNA556992_P_NODE_625634_length_257_cov_1.353261_g623445_i0 PRJNA556992 625634 257 1.353261 3.47788077 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 159 1.54e-47   NR USN96382.1 2052152 g623445 i0 89.4 0.992217898832685 85 9 99.2 0 257 3 79 163 USN96382.1 MAG: signal peptidase I [Candidatus Nomurabacteria bacterium] diamond 255 159 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31500862 31500862 PRJNA556992_P_NODE_572236_length_261_cov_2.053191_g570047_i0 PRJNA556992 572236 261 2.053191 5.35882851 Candidatus Nomurabacteria bacterium CG22_combo_CG1 2052152 Bacteria Bacteria 108 7.01e-27   NR PIP69236.1 1974732 g570047 i0 58.1 0.988505747126437 86 36 98.9 0 259 2 118 203 PIP69236.1 MAG: hypothetical protein COW91_00375, partial [Candidatus Nomurabacteria bacterium CG22_combo_CG10-13_8_21_14_all_32_8] diamond 258 108 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium CG22_combo_CG10-13_8_21_14_all_32_8
31532547 31532547 PRJNA556992_P_NODE_647656_length_255_cov_1.972527_g645467_i0 PRJNA556992 647656 255 1.972527 5.02994385 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 92 1.48e-19   NR NVN96642.1 2052152 g645467 i0 57.7 0.917647058823529 78 33 91.8 0 235 2 208 285 NVN96642.1 DnaJ domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 234 92 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31658807 31658807 PRJNA556992_P_NODE_850477_length_243_cov_2.452941_g848287_i0 PRJNA556992 850477 243 2.452941 5.96064663 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 78.2 1.27e-14   NR MCC7160317.1 2052152 g848287 i0 58.2 0.975308641975309 79 23 97.5 2 4 240 1 69 MCC7160317.1 tail fiber domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 237 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32084344 32084344 PRJNA556992_P_NODE_226738_length_313_cov_3.045833_g224550_i0 PRJNA556992 226738 313 3.045833 9.53345729 Bacteria 2 Bacteria Bacteria 174 5.21e-53   NR MCX6757026.1 2052152 g224550 i0 87.4 7.26517571884984 95 12 91.1 0 311 27 92 186 MCX6757026.1 50S ribosomal protein L5 [Candidatus Nomurabacteria bacterium] diamond 2274 174 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32355270 32355270 PRJNA556992_P_NODE_863799_length_242_cov_5.029586_g861609_i0 PRJNA556992 863799 242 5.029586 12.17159812 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 61.2 1.11e-8   NR NVN96639.1 2052152 g861609 i0 43.9 1.01652892561983 82 44 99.2 1 242 3 556 637 NVN96639.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 246 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32417992 32417992 PRJNA556992_P_NODE_1131319_length_205_cov_8.977273_g1129128_i0 PRJNA556992 1131319 205 8.977273 18.40340965 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 114 1.28e-27   NR HCC06478.1 2052152 g1129128 i0 88.1 0.980487804878049 67 8 98 0 3 203 448 514 HCC06478.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 201 114 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32796586 32796586 PRJNA556992_P_NODE_815720_length_245_cov_1.697674_g813530_i0 PRJNA556992 815720 245 1.697674 4.1593013 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 163 1.82e-44   NR MCX6756651.1 2052152 g813530 i0 92.6 2.97551020408163 81 6 99.2 0 243 1 331 411 MCX6756651.1 class I tRNA ligase family protein [Candidatus Nomurabacteria bacterium] diamond 729 163 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;